Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Gm5786-201ENSMUST00000085368 882 ntBASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9d-4A0A0G2JG37 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-4A0A0G2JG37 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-4A0A0G2JG37 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-4A0A0G2JG37 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.3□□□□□ -0.28
Trav9d-4A0A0G2JG37 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav9d-4A0A0G2JG37 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-4A0A0G2JG37 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-4A0A0G2JG37 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-4A0A0G2JG37 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav9d-4A0A0G2JG37 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav9d-4A0A0G2JG37 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav9d-4A0A0G2JG37 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav9d-4A0A0G2JG37 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav9d-4A0A0G2JG37 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9d-4A0A0G2JG37 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-4A0A0G2JG37 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-4A0A0G2JG37 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-4A0A0G2JG37 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-4A0A0G2JG37 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-4A0A0G2JG37 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-4A0A0G2JG37 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-4A0A0G2JG37 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-4A0A0G2JG37 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-4A0A0G2JG37 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-4A0A0G2JG37 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-4A0A0G2JG37 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav9d-4A0A0G2JG37 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-4A0A0G2JG37 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-4A0A0G2JG37 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-4A0A0G2JG37 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-4A0A0G2JG37 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-4A0A0G2JG37 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-4A0A0G2JG37 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9d-4A0A0G2JG37 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav9d-4A0A0G2JG37 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-4A0A0G2JG37 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav9d-4A0A0G2JG37 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-4A0A0G2JG37 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-4A0A0G2JG37 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-4A0A0G2JG37 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-4A0A0G2JG37 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-4A0A0G2JG37 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-4A0A0G2JG37 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-4A0A0G2JG37 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav9d-4A0A0G2JG37 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav9d-4A0A0G2JG37 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-4A0A0G2JG37 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav9d-4A0A0G2JG37 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-4A0A0G2JG37 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav9d-4A0A0G2JG37 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-4A0A0G2JG37 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9d-4A0A0G2JG37 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav9d-4A0A0G2JG37 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav9d-4A0A0G2JG37 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav9d-4A0A0G2JG37 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav9d-4A0A0G2JG37 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Trav9d-4A0A0G2JG37 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9d-4A0A0G2JG37 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9d-4A0A0G2JG37 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav9d-4A0A0G2JG37 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9d-4A0A0G2JG37 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav9d-4A0A0G2JG37 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9d-4A0A0G2JG37 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9d-4A0A0G2JG37 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9d-4A0A0G2JG37 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav9d-4A0A0G2JG37 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms