Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV3A0A0B4J244 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV3A0A0B4J244 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV3A0A0B4J244 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV3A0A0B4J244 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV3A0A0B4J244 AL137060.1-201ENST00000618151 2648 ntBASIC17.62■□□□□ 0.41
TRAV3A0A0B4J244 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV3A0A0B4J244 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV3A0A0B4J244 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV3A0A0B4J244 AL451085.2-201ENST00000605085 799 ntBASIC17.62■□□□□ 0.41
TRAV3A0A0B4J244 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRAV3A0A0B4J244 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV3A0A0B4J244 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRAV3A0A0B4J244 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV3A0A0B4J244 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV3A0A0B4J244 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRAV3A0A0B4J244 C17orf82-201ENST00000623772 1530 ntBASIC17.62■□□□□ 0.41
TRAV3A0A0B4J244 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV3A0A0B4J244 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV3A0A0B4J244 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV3A0A0B4J244 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAV3A0A0B4J244 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV3A0A0B4J244 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV3A0A0B4J244 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV3A0A0B4J244 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV3A0A0B4J244 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV3A0A0B4J244 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV3A0A0B4J244 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV3A0A0B4J244 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRAV3A0A0B4J244 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV3A0A0B4J244 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRAV3A0A0B4J244 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV3A0A0B4J244 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.6■□□□□ 0.41
TRAV3A0A0B4J244 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV3A0A0B4J244 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV3A0A0B4J244 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV3A0A0B4J244 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV3A0A0B4J244 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRAV3A0A0B4J244 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV3A0A0B4J244 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRAV3A0A0B4J244 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV3A0A0B4J244 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV3A0A0B4J244 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
TRAV3A0A0B4J244 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV3A0A0B4J244 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TRAV3A0A0B4J244 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV3A0A0B4J244 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV3A0A0B4J244 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV3A0A0B4J244 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV3A0A0B4J244 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAV3A0A0B4J244 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV3A0A0B4J244 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV3A0A0B4J244 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRAV3A0A0B4J244 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TRAV3A0A0B4J244 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV3A0A0B4J244 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
TRAV3A0A0B4J244 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV3A0A0B4J244 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV3A0A0B4J244 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV3A0A0B4J244 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV3A0A0B4J244 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV3A0A0B4J244 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV3A0A0B4J244 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV3A0A0B4J244 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV3A0A0B4J244 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 UNC93B8-201ENST00000511903 705 ntBASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV3A0A0B4J244 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV3A0A0B4J244 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV3A0A0B4J244 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV3A0A0B4J244 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV3A0A0B4J244 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV3A0A0B4J244 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV3A0A0B4J244 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV3A0A0B4J244 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV3A0A0B4J244 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV3A0A0B4J244 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV3A0A0B4J244 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV3A0A0B4J244 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV3A0A0B4J244 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms