Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Gm10232-201ENSMUST00000089221 720 ntBASIC13.4□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC13.39□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Gm7143-201ENSMUST00000222811 859 ntBASIC13.38□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Gm5921-201ENSMUST00000075898 882 ntBASIC13.38□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.38□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Golph3-205ENSMUST00000228671 2842 ntBASIC13.37□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC13.37□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms