Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav9d-1A0A075B699 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9d-1A0A075B699 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9d-1A0A075B699 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9d-1A0A075B699 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Trav9d-1A0A075B699 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9d-1A0A075B699 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9d-1A0A075B699 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9d-1A0A075B699 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-1A0A075B699 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-1A0A075B699 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav9d-1A0A075B699 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav9d-1A0A075B699 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-1A0A075B699 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-1A0A075B699 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Trav9d-1A0A075B699 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav9d-1A0A075B699 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-1A0A075B699 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-1A0A075B699 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.97□□□□□ -0.01
Trav9d-1A0A075B699 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav9d-1A0A075B699 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-1A0A075B699 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.97□□□□□ -0.01
Trav9d-1A0A075B699 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-1A0A075B699 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-1A0A075B699 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Trav9d-1A0A075B699 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-1A0A075B699 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-1A0A075B699 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9d-1A0A075B699 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9d-1A0A075B699 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav9d-1A0A075B699 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9d-1A0A075B699 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav9d-1A0A075B699 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9d-1A0A075B699 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9d-1A0A075B699 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9d-1A0A075B699 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9d-1A0A075B699 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trav9d-1A0A075B699 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-1A0A075B699 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-1A0A075B699 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-1A0A075B699 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-1A0A075B699 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-1A0A075B699 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.95□□□□□ -0.02
Trav9d-1A0A075B699 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-1A0A075B699 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav9d-1A0A075B699 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-1A0A075B699 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-1A0A075B699 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-1A0A075B699 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-1A0A075B699 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-1A0A075B699 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-1A0A075B699 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-1A0A075B699 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-1A0A075B699 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-1A0A075B699 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-1A0A075B699 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav9d-1A0A075B699 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-1A0A075B699 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-1A0A075B699 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav9d-1A0A075B699 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.94□□□□□ -0.02
Trav9d-1A0A075B699 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.94□□□□□ -0.02
Trav9d-1A0A075B699 Golph3-205ENSMUST00000228671 2842 ntBASIC14.94□□□□□ -0.02
Trav9d-1A0A075B699 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav9d-1A0A075B699 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-1A0A075B699 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-1A0A075B699 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-1A0A075B699 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-1A0A075B699 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-1A0A075B699 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 Gm14117-201ENSMUST00000122417 843 ntBASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-1A0A075B699 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-1A0A075B699 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-1A0A075B699 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-1A0A075B699 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-1A0A075B699 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-1A0A075B699 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-1A0A075B699 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-1A0A075B699 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.92□□□□□ -0.02
Trav9d-1A0A075B699 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-1A0A075B699 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-1A0A075B699 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-1A0A075B699 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms