Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
MTHFRP42898 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC13.57□□□□□ -0.24
MTHFRP42898 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC13.57□□□□□ -0.24
MTHFRP42898 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
MTHFRP42898 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC13.57□□□□□ -0.24
MTHFRP42898 OR2A15P-201ENST00000463814 900 ntBASIC13.57□□□□□ -0.24
MTHFRP42898 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC13.57□□□□□ -0.24
MTHFRP42898 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 ZG16B-204ENST00000572863 716 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
MTHFRP42898 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC13.57□□□□□ -0.24
MTHFRP42898 METTL23-211ENST00000589977 617 ntTSL 3 BASIC13.57□□□□□ -0.24
MTHFRP42898 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
MTHFRP42898 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC13.57□□□□□ -0.24
MTHFRP42898 MIR1914-201ENST00000607800 80 ntBASIC13.57□□□□□ -0.24
MTHFRP42898 AC099552.4-201ENST00000624248 949 ntBASIC13.57□□□□□ -0.24
MTHFRP42898 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.57□□□□□ -0.24
MTHFRP42898 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC13.57□□□□□ -0.24
MTHFRP42898 HNRNPLP1-201ENST00000421896 1501 ntBASIC13.57□□□□□ -0.24
MTHFRP42898 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 AC005014.1-201ENST00000432006 2976 ntBASIC13.57□□□□□ -0.24
MTHFRP42898 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 LUC7L-203ENST00000397780 1335 ntTSL 5 BASIC13.57□□□□□ -0.24
MTHFRP42898 AC109326.1-201ENST00000624705 1321 ntBASIC13.57□□□□□ -0.24
MTHFRP42898 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
MTHFRP42898 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
MTHFRP42898 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.57□□□□□ -0.24
MTHFRP42898 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
MTHFRP42898 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.56□□□□□ -0.24
MTHFRP42898 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC13.56□□□□□ -0.24
MTHFRP42898 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
MTHFRP42898 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.56□□□□□ -0.24
MTHFRP42898 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.56□□□□□ -0.24
MTHFRP42898 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC13.56□□□□□ -0.24
MTHFRP42898 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
MTHFRP42898 AL391647.1-201ENST00000395664 511 ntBASIC13.56□□□□□ -0.24
MTHFRP42898 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 HNRNPA1P68-201ENST00000425806 979 ntBASIC13.56□□□□□ -0.24
MTHFRP42898 AC007312.1-201ENST00000427493 258 ntBASIC13.56□□□□□ -0.24
MTHFRP42898 AC067942.2-201ENST00000506227 1268 ntBASIC13.56□□□□□ -0.24
MTHFRP42898 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC13.56□□□□□ -0.24
MTHFRP42898 AC080023.2-201ENST00000532615 208 ntBASIC13.56□□□□□ -0.24
MTHFRP42898 AL137779.3-201ENST00000553295 729 ntBASIC13.56□□□□□ -0.24
MTHFRP42898 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC13.56□□□□□ -0.24
MTHFRP42898 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC13.56□□□□□ -0.24
MTHFRP42898 DERL2-206ENST00000572834 589 ntTSL 3 BASIC13.56□□□□□ -0.24
MTHFRP42898 AC097634.2-201ENST00000615819 604 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC13.56□□□□□ -0.24
MTHFRP42898 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC13.56□□□□□ -0.24
MTHFRP42898 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC13.56□□□□□ -0.24
MTHFRP42898 MIR941-1-201ENST00000636396 72 ntBASIC13.56□□□□□ -0.24
MTHFRP42898 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 BX005132.1-201ENST00000641403 1580 ntBASIC13.56□□□□□ -0.24
MTHFRP42898 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 ALOX15P2-201ENST00000340858 1897 ntBASIC13.56□□□□□ -0.24
MTHFRP42898 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 AC099689.1-201ENST00000624383 1302 ntBASIC13.56□□□□□ -0.24
MTHFRP42898 AC005549.1-201ENST00000579438 1629 ntBASIC13.56□□□□□ -0.24
MTHFRP42898 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.56□□□□□ -0.24
MTHFRP42898 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.56□□□□□ -0.24
MTHFRP42898 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC13.56□□□□□ -0.24
MTHFRP42898 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 AC090403.1-201ENST00000584546 1352 ntTSL 2 BASIC13.56□□□□□ -0.24
MTHFRP42898 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MTHFRP42898 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms