Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EFCAB3Q8N7B9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
EFCAB3Q8N7B9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
EFCAB3Q8N7B9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
EFCAB3Q8N7B9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
EFCAB3Q8N7B9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.64■■□□□ 1.05
EFCAB3Q8N7B9 AC133561.4-201ENST00000566112 224 ntBASIC21.64■■□□□ 1.05
EFCAB3Q8N7B9 AC092666.2-201ENST00000613287 246 ntBASIC21.64■■□□□ 1.05
EFCAB3Q8N7B9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.64■■□□□ 1.05
EFCAB3Q8N7B9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.64■■□□□ 1.05
EFCAB3Q8N7B9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
EFCAB3Q8N7B9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
EFCAB3Q8N7B9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
EFCAB3Q8N7B9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
EFCAB3Q8N7B9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
EFCAB3Q8N7B9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
EFCAB3Q8N7B9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.63■■□□□ 1.05
EFCAB3Q8N7B9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
EFCAB3Q8N7B9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.63■■□□□ 1.05
EFCAB3Q8N7B9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
EFCAB3Q8N7B9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.63■■□□□ 1.05
EFCAB3Q8N7B9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
EFCAB3Q8N7B9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.63■■□□□ 1.05
EFCAB3Q8N7B9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
EFCAB3Q8N7B9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.63■■□□□ 1.05
EFCAB3Q8N7B9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.63■■□□□ 1.05
EFCAB3Q8N7B9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
EFCAB3Q8N7B9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.63■■□□□ 1.05
EFCAB3Q8N7B9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.63■■□□□ 1.05
EFCAB3Q8N7B9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.63■■□□□ 1.05
EFCAB3Q8N7B9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
EFCAB3Q8N7B9 ALDH1A3-203ENST00000557963 1670 ntBASIC21.63■■□□□ 1.05
EFCAB3Q8N7B9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCAB3Q8N7B9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCAB3Q8N7B9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.62■■□□□ 1.05
EFCAB3Q8N7B9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCAB3Q8N7B9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
EFCAB3Q8N7B9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCAB3Q8N7B9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.62■■□□□ 1.05
EFCAB3Q8N7B9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.62■■□□□ 1.05
EFCAB3Q8N7B9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EFCAB3Q8N7B9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
EFCAB3Q8N7B9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCAB3Q8N7B9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCAB3Q8N7B9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCAB3Q8N7B9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCAB3Q8N7B9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.61■■□□□ 1.05
EFCAB3Q8N7B9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.61■■□□□ 1.05
EFCAB3Q8N7B9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.61■■□□□ 1.05
EFCAB3Q8N7B9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCAB3Q8N7B9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCAB3Q8N7B9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.61■■□□□ 1.05
EFCAB3Q8N7B9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EFCAB3Q8N7B9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.61■■□□□ 1.05
EFCAB3Q8N7B9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.6■■□□□ 1.05
EFCAB3Q8N7B9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EFCAB3Q8N7B9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
EFCAB3Q8N7B9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EFCAB3Q8N7B9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
EFCAB3Q8N7B9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.6■■□□□ 1.05
EFCAB3Q8N7B9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
EFCAB3Q8N7B9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
EFCAB3Q8N7B9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.6■■□□□ 1.05
EFCAB3Q8N7B9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EFCAB3Q8N7B9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
EFCAB3Q8N7B9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.59■■□□□ 1.05
EFCAB3Q8N7B9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
EFCAB3Q8N7B9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
EFCAB3Q8N7B9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
EFCAB3Q8N7B9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
EFCAB3Q8N7B9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
EFCAB3Q8N7B9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
EFCAB3Q8N7B9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.59■■□□□ 1.05
EFCAB3Q8N7B9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.59■■□□□ 1.05
EFCAB3Q8N7B9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
EFCAB3Q8N7B9 AC242852.2-201ENST00000615738 1807 ntBASIC21.59■■□□□ 1.05
EFCAB3Q8N7B9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.59■■□□□ 1.05
EFCAB3Q8N7B9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
EFCAB3Q8N7B9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.58■■□□□ 1.05
EFCAB3Q8N7B9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
EFCAB3Q8N7B9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
EFCAB3Q8N7B9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
EFCAB3Q8N7B9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
EFCAB3Q8N7B9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
EFCAB3Q8N7B9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
EFCAB3Q8N7B9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.58■■□□□ 1.05
EFCAB3Q8N7B9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.58■■□□□ 1.05
EFCAB3Q8N7B9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.58■■□□□ 1.04
EFCAB3Q8N7B9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
EFCAB3Q8N7B9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
EFCAB3Q8N7B9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 MIR4466-201ENST00000606121 54 ntBASIC21.57■■□□□ 1.04
EFCAB3Q8N7B9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms