Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim68Q8K243 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim68Q8K243 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.11■□□□□ 0.97
Trim68Q8K243 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim68Q8K243 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim68Q8K243 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim68Q8K243 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim68Q8K243 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim68Q8K243 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim68Q8K243 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim68Q8K243 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim68Q8K243 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim68Q8K243 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Trim68Q8K243 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim68Q8K243 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim68Q8K243 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim68Q8K243 Gm12933-201ENSMUST00000120203 872 ntBASIC21.1■□□□□ 0.97
Trim68Q8K243 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.1■□□□□ 0.97
Trim68Q8K243 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim68Q8K243 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim68Q8K243 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim68Q8K243 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim68Q8K243 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.09■□□□□ 0.97
Trim68Q8K243 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim68Q8K243 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Trim68Q8K243 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim68Q8K243 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim68Q8K243 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim68Q8K243 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.09■□□□□ 0.97
Trim68Q8K243 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Trim68Q8K243 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim68Q8K243 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim68Q8K243 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim68Q8K243 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.08■□□□□ 0.97
Trim68Q8K243 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim68Q8K243 Iqck-206ENSMUST00000208658 2891 ntBASIC21.08■□□□□ 0.97
Trim68Q8K243 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim68Q8K243 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim68Q8K243 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Trim68Q8K243 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim68Q8K243 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.08■□□□□ 0.97
Trim68Q8K243 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.08■□□□□ 0.97
Trim68Q8K243 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.08■□□□□ 0.97
Trim68Q8K243 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Trim68Q8K243 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.08■□□□□ 0.97
Trim68Q8K243 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.08■□□□□ 0.97
Trim68Q8K243 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim68Q8K243 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim68Q8K243 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Trim68Q8K243 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim68Q8K243 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
Trim68Q8K243 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.07■□□□□ 0.96
Trim68Q8K243 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim68Q8K243 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim68Q8K243 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim68Q8K243 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.07■□□□□ 0.96
Trim68Q8K243 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim68Q8K243 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Trim68Q8K243 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Trim68Q8K243 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim68Q8K243 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim68Q8K243 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim68Q8K243 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Trim68Q8K243 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.06■□□□□ 0.96
Trim68Q8K243 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim68Q8K243 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim68Q8K243 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim68Q8K243 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim68Q8K243 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim68Q8K243 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim68Q8K243 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim68Q8K243 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim68Q8K243 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Trim68Q8K243 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim68Q8K243 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.05■□□□□ 0.96
Trim68Q8K243 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
Trim68Q8K243 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim68Q8K243 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim68Q8K243 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim68Q8K243 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim68Q8K243 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Trim68Q8K243 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim68Q8K243 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim68Q8K243 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim68Q8K243 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Trim68Q8K243 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim68Q8K243 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim68Q8K243 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim68Q8K243 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim68Q8K243 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim68Q8K243 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim68Q8K243 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim68Q8K243 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Trim68Q8K243 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.04■□□□□ 0.96
Trim68Q8K243 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim68Q8K243 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.04■□□□□ 0.96
Trim68Q8K243 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim68Q8K243 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim68Q8K243 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim68Q8K243 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms