Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
SMC5Q8IY18 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMC5Q8IY18 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMC5Q8IY18 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMC5Q8IY18 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMC5Q8IY18 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMC5Q8IY18 CA15P2-201ENST00000611168 834 ntBASIC27.36■■□□□ 1.97
SMC5Q8IY18 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC27.36■■□□□ 1.97
SMC5Q8IY18 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMC5Q8IY18 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMC5Q8IY18 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMC5Q8IY18 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC27.36■■□□□ 1.97
SMC5Q8IY18 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMC5Q8IY18 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC27.36■■□□□ 1.97
SMC5Q8IY18 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SMC5Q8IY18 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
SMC5Q8IY18 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC27.35■■□□□ 1.97
SMC5Q8IY18 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC27.35■■□□□ 1.97
SMC5Q8IY18 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
SMC5Q8IY18 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SMC5Q8IY18 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SMC5Q8IY18 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SMC5Q8IY18 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SMC5Q8IY18 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC27.34■■□□□ 1.97
SMC5Q8IY18 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SMC5Q8IY18 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC27.34■■□□□ 1.97
SMC5Q8IY18 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.34■■□□□ 1.97
SMC5Q8IY18 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SMC5Q8IY18 RASSF1-AS1-201ENST00000629828 790 ntBASIC27.34■■□□□ 1.97
SMC5Q8IY18 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
SMC5Q8IY18 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC27.34■■□□□ 1.97
SMC5Q8IY18 C11orf96-202ENST00000528572 1834 ntBASIC27.34■■□□□ 1.97
SMC5Q8IY18 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SMC5Q8IY18 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SMC5Q8IY18 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC27.33■■□□□ 1.97
SMC5Q8IY18 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC27.33■■□□□ 1.97
SMC5Q8IY18 MIR3621-201ENST00000580529 85 ntBASIC27.33■■□□□ 1.97
SMC5Q8IY18 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
SMC5Q8IY18 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
SMC5Q8IY18 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC27.33■■□□□ 1.97
SMC5Q8IY18 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SMC5Q8IY18 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.96
SMC5Q8IY18 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC27.32■■□□□ 1.96
SMC5Q8IY18 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SMC5Q8IY18 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC27.32■■□□□ 1.96
SMC5Q8IY18 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SMC5Q8IY18 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SMC5Q8IY18 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
SMC5Q8IY18 AC241377.3-202ENST00000626088 1088 ntBASIC27.32■■□□□ 1.96
SMC5Q8IY18 AC241585.3-202ENST00000628937 1088 ntBASIC27.32■■□□□ 1.96
SMC5Q8IY18 AC245100.8-202ENST00000629247 1058 ntBASIC27.32■■□□□ 1.96
SMC5Q8IY18 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC27.32■■□□□ 1.96
SMC5Q8IY18 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
SMC5Q8IY18 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SMC5Q8IY18 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SMC5Q8IY18 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SMC5Q8IY18 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SMC5Q8IY18 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SMC5Q8IY18 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
SMC5Q8IY18 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC27.31■■□□□ 1.96
SMC5Q8IY18 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SMC5Q8IY18 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC27.31■■□□□ 1.96
SMC5Q8IY18 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC27.31■■□□□ 1.96
SMC5Q8IY18 TRIR-205ENST00000592273 783 ntTSL 3 BASIC27.31■■□□□ 1.96
SMC5Q8IY18 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SMC5Q8IY18 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC27.31■■□□□ 1.96
SMC5Q8IY18 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SMC5Q8IY18 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SMC5Q8IY18 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
SMC5Q8IY18 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC27.31■■□□□ 1.96
SMC5Q8IY18 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC27.31■■□□□ 1.96
SMC5Q8IY18 WWC2-AS2-201ENST00000578387 2183 ntBASIC27.31■■□□□ 1.96
SMC5Q8IY18 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC27.3■■□□□ 1.96
SMC5Q8IY18 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SMC5Q8IY18 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.3■■□□□ 1.96
SMC5Q8IY18 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SMC5Q8IY18 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SMC5Q8IY18 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC27.3■■□□□ 1.96
SMC5Q8IY18 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC27.29■■□□□ 1.96
SMC5Q8IY18 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SMC5Q8IY18 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC27.29■■□□□ 1.96
SMC5Q8IY18 AC006455.2-201ENST00000429931 906 ntBASIC27.29■■□□□ 1.96
SMC5Q8IY18 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC27.29■■□□□ 1.96
SMC5Q8IY18 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SMC5Q8IY18 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC27.29■■□□□ 1.96
SMC5Q8IY18 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SMC5Q8IY18 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SMC5Q8IY18 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SMC5Q8IY18 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SMC5Q8IY18 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SMC5Q8IY18 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC27.29■■□□□ 1.96
SMC5Q8IY18 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SMC5Q8IY18 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC27.28■■□□□ 1.96
SMC5Q8IY18 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC27.28■■□□□ 1.96
SMC5Q8IY18 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC27.28■■□□□ 1.96
SMC5Q8IY18 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.28■■□□□ 1.96
SMC5Q8IY18 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SMC5Q8IY18 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SMC5Q8IY18 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SMC5Q8IY18 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms