Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc90bQ8C3X2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc90bQ8C3X2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc90bQ8C3X2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc90bQ8C3X2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.9■□□□□ 0.62
Ccdc90bQ8C3X2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc90bQ8C3X2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc90bQ8C3X2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc90bQ8C3X2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.9■□□□□ 0.62
Ccdc90bQ8C3X2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc90bQ8C3X2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc90bQ8C3X2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc90bQ8C3X2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc90bQ8C3X2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc90bQ8C3X2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc90bQ8C3X2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc90bQ8C3X2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc90bQ8C3X2 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.89■□□□□ 0.61
Ccdc90bQ8C3X2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc90bQ8C3X2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc90bQ8C3X2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc90bQ8C3X2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc90bQ8C3X2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc90bQ8C3X2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc90bQ8C3X2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc90bQ8C3X2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc90bQ8C3X2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc90bQ8C3X2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc90bQ8C3X2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc90bQ8C3X2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc90bQ8C3X2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ccdc90bQ8C3X2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc90bQ8C3X2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc90bQ8C3X2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc90bQ8C3X2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc90bQ8C3X2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc90bQ8C3X2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc90bQ8C3X2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc90bQ8C3X2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.87■□□□□ 0.61
Ccdc90bQ8C3X2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.87■□□□□ 0.61
Ccdc90bQ8C3X2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.87■□□□□ 0.61
Ccdc90bQ8C3X2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc90bQ8C3X2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc90bQ8C3X2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc90bQ8C3X2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc90bQ8C3X2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc90bQ8C3X2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc90bQ8C3X2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Ccdc90bQ8C3X2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc90bQ8C3X2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc90bQ8C3X2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc90bQ8C3X2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc90bQ8C3X2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccdc90bQ8C3X2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ccdc90bQ8C3X2 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.86■□□□□ 0.61
Ccdc90bQ8C3X2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc90bQ8C3X2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc90bQ8C3X2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.85■□□□□ 0.61
Ccdc90bQ8C3X2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc90bQ8C3X2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc90bQ8C3X2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc90bQ8C3X2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc90bQ8C3X2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc90bQ8C3X2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc90bQ8C3X2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc90bQ8C3X2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc90bQ8C3X2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.84■□□□□ 0.61
Ccdc90bQ8C3X2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc90bQ8C3X2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc90bQ8C3X2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc90bQ8C3X2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.84■□□□□ 0.61
Ccdc90bQ8C3X2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.84■□□□□ 0.61
Ccdc90bQ8C3X2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc90bQ8C3X2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Ccdc90bQ8C3X2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc90bQ8C3X2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc90bQ8C3X2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc90bQ8C3X2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc90bQ8C3X2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ccdc90bQ8C3X2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc90bQ8C3X2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc90bQ8C3X2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc90bQ8C3X2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc90bQ8C3X2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc90bQ8C3X2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc90bQ8C3X2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc90bQ8C3X2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc90bQ8C3X2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc90bQ8C3X2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc90bQ8C3X2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc90bQ8C3X2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc90bQ8C3X2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc90bQ8C3X2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc90bQ8C3X2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc90bQ8C3X2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc90bQ8C3X2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc90bQ8C3X2 Gm10399-202ENSMUST00000202768 748 ntBASIC18.81■□□□□ 0.6
Ccdc90bQ8C3X2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ccdc90bQ8C3X2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc90bQ8C3X2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms