Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scn2bQ56A07 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.33■□□□□ 0.69
Scn2bQ56A07 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scn2bQ56A07 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.33■□□□□ 0.68
Scn2bQ56A07 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scn2bQ56A07 Gm9847-201ENSMUST00000052528 599 ntBASIC19.33■□□□□ 0.68
Scn2bQ56A07 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Scn2bQ56A07 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Scn2bQ56A07 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scn2bQ56A07 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn2bQ56A07 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scn2bQ56A07 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scn2bQ56A07 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Scn2bQ56A07 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn2bQ56A07 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scn2bQ56A07 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.32■□□□□ 0.68
Scn2bQ56A07 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn2bQ56A07 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn2bQ56A07 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn2bQ56A07 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scn2bQ56A07 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn2bQ56A07 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn2bQ56A07 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn2bQ56A07 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scn2bQ56A07 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn2bQ56A07 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn2bQ56A07 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn2bQ56A07 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn2bQ56A07 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.3■□□□□ 0.68
Scn2bQ56A07 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.3■□□□□ 0.68
Scn2bQ56A07 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn2bQ56A07 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scn2bQ56A07 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scn2bQ56A07 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn2bQ56A07 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Scn2bQ56A07 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn2bQ56A07 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn2bQ56A07 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn2bQ56A07 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn2bQ56A07 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scn2bQ56A07 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Scn2bQ56A07 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Scn2bQ56A07 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn2bQ56A07 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scn2bQ56A07 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.28■□□□□ 0.68
Scn2bQ56A07 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Scn2bQ56A07 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn2bQ56A07 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn2bQ56A07 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.28■□□□□ 0.68
Scn2bQ56A07 Gm12922-201ENSMUST00000120626 809 ntBASIC19.28■□□□□ 0.68
Scn2bQ56A07 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.28■□□□□ 0.68
Scn2bQ56A07 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Scn2bQ56A07 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn2bQ56A07 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn2bQ56A07 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scn2bQ56A07 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn2bQ56A07 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn2bQ56A07 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Scn2bQ56A07 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn2bQ56A07 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn2bQ56A07 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Scn2bQ56A07 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
Scn2bQ56A07 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn2bQ56A07 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn2bQ56A07 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn2bQ56A07 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn2bQ56A07 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn2bQ56A07 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scn2bQ56A07 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn2bQ56A07 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
Scn2bQ56A07 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scn2bQ56A07 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.26■□□□□ 0.67
Scn2bQ56A07 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Scn2bQ56A07 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.26■□□□□ 0.67
Scn2bQ56A07 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.26■□□□□ 0.67
Scn2bQ56A07 Gm13241-201ENSMUST00000094493 780 ntBASIC19.26■□□□□ 0.67
Scn2bQ56A07 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Scn2bQ56A07 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn2bQ56A07 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Scn2bQ56A07 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn2bQ56A07 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn2bQ56A07 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn2bQ56A07 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Scn2bQ56A07 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn2bQ56A07 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn2bQ56A07 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn2bQ56A07 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn2bQ56A07 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn2bQ56A07 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn2bQ56A07 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Scn2bQ56A07 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.25■□□□□ 0.67
Scn2bQ56A07 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.25■□□□□ 0.67
Scn2bQ56A07 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Scn2bQ56A07 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Scn2bQ56A07 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Scn2bQ56A07 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn2bQ56A07 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn2bQ56A07 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn2bQ56A07 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.24■□□□□ 0.67
Scn2bQ56A07 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms