Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATP6AP1LQ52LC2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP6AP1LQ52LC2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
ATP6AP1LQ52LC2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATP6AP1LQ52LC2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.22■□□□□ 0.99
ATP6AP1LQ52LC2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.22■□□□□ 0.99
ATP6AP1LQ52LC2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATP6AP1LQ52LC2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ATP6AP1LQ52LC2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.22■□□□□ 0.99
ATP6AP1LQ52LC2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ATP6AP1LQ52LC2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP6AP1LQ52LC2 DUX4L4-201ENST00000566884 1269 ntBASIC21.21■□□□□ 0.99
ATP6AP1LQ52LC2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP6AP1LQ52LC2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.21■□□□□ 0.99
ATP6AP1LQ52LC2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP6AP1LQ52LC2 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.21■□□□□ 0.99
ATP6AP1LQ52LC2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP6AP1LQ52LC2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP6AP1LQ52LC2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP6AP1LQ52LC2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP6AP1LQ52LC2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP6AP1LQ52LC2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.2■□□□□ 0.98
ATP6AP1LQ52LC2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ATP6AP1LQ52LC2 LINC01960-201ENST00000563759 1884 ntBASIC21.2■□□□□ 0.98
ATP6AP1LQ52LC2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ATP6AP1LQ52LC2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
ATP6AP1LQ52LC2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.2■□□□□ 0.98
ATP6AP1LQ52LC2 AC092028.1-203ENST00000608262 953 ntBASIC21.2■□□□□ 0.98
ATP6AP1LQ52LC2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
ATP6AP1LQ52LC2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.2■□□□□ 0.98
ATP6AP1LQ52LC2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP6AP1LQ52LC2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP6AP1LQ52LC2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP6AP1LQ52LC2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6AP1LQ52LC2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6AP1LQ52LC2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6AP1LQ52LC2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
ATP6AP1LQ52LC2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6AP1LQ52LC2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP6AP1LQ52LC2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6AP1LQ52LC2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP6AP1LQ52LC2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6AP1LQ52LC2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP6AP1LQ52LC2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP6AP1LQ52LC2 KRT125P-201ENST00000546827 989 ntBASIC21.19■□□□□ 0.98
ATP6AP1LQ52LC2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
ATP6AP1LQ52LC2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
ATP6AP1LQ52LC2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6AP1LQ52LC2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6AP1LQ52LC2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6AP1LQ52LC2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6AP1LQ52LC2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ATP6AP1LQ52LC2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP6AP1LQ52LC2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6AP1LQ52LC2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ATP6AP1LQ52LC2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.18■□□□□ 0.98
ATP6AP1LQ52LC2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP6AP1LQ52LC2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ATP6AP1LQ52LC2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6AP1LQ52LC2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ATP6AP1LQ52LC2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ATP6AP1LQ52LC2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ATP6AP1LQ52LC2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6AP1LQ52LC2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6AP1LQ52LC2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP6AP1LQ52LC2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6AP1LQ52LC2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ATP6AP1LQ52LC2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ATP6AP1LQ52LC2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6AP1LQ52LC2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6AP1LQ52LC2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP6AP1LQ52LC2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6AP1LQ52LC2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6AP1LQ52LC2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6AP1LQ52LC2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6AP1LQ52LC2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ATP6AP1LQ52LC2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6AP1LQ52LC2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6AP1LQ52LC2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6AP1LQ52LC2 MTDHP2-201ENST00000601468 714 ntBASIC21.16■□□□□ 0.98
ATP6AP1LQ52LC2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6AP1LQ52LC2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6AP1LQ52LC2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP6AP1LQ52LC2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6AP1LQ52LC2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6AP1LQ52LC2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ATP6AP1LQ52LC2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6AP1LQ52LC2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6AP1LQ52LC2 Z92544.1-202ENST00000571933 1220 ntBASIC21.15■□□□□ 0.98
ATP6AP1LQ52LC2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6AP1LQ52LC2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6AP1LQ52LC2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6AP1LQ52LC2 AC007375.3-201ENST00000600936 2314 ntBASIC21.15■□□□□ 0.98
ATP6AP1LQ52LC2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.15■□□□□ 0.98
ATP6AP1LQ52LC2 AC009102.2-201ENST00000606772 1639 ntBASIC21.15■□□□□ 0.98
ATP6AP1LQ52LC2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP6AP1LQ52LC2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
ATP6AP1LQ52LC2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP6AP1LQ52LC2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP6AP1LQ52LC2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms