Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shcbp1lQ3TTP0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.66■□□□□ 0.74
Shcbp1lQ3TTP0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shcbp1lQ3TTP0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shcbp1lQ3TTP0 Iqck-206ENSMUST00000208658 2891 ntBASIC19.66■□□□□ 0.74
Shcbp1lQ3TTP0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shcbp1lQ3TTP0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Shcbp1lQ3TTP0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.65■□□□□ 0.74
Shcbp1lQ3TTP0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Shcbp1lQ3TTP0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
Shcbp1lQ3TTP0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shcbp1lQ3TTP0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
Shcbp1lQ3TTP0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Shcbp1lQ3TTP0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shcbp1lQ3TTP0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shcbp1lQ3TTP0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shcbp1lQ3TTP0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shcbp1lQ3TTP0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shcbp1lQ3TTP0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shcbp1lQ3TTP0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.64■□□□□ 0.73
Shcbp1lQ3TTP0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Shcbp1lQ3TTP0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shcbp1lQ3TTP0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shcbp1lQ3TTP0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shcbp1lQ3TTP0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shcbp1lQ3TTP0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Shcbp1lQ3TTP0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shcbp1lQ3TTP0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shcbp1lQ3TTP0 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.63■□□□□ 0.73
Shcbp1lQ3TTP0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Shcbp1lQ3TTP0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.63■□□□□ 0.73
Shcbp1lQ3TTP0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shcbp1lQ3TTP0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shcbp1lQ3TTP0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shcbp1lQ3TTP0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shcbp1lQ3TTP0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shcbp1lQ3TTP0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shcbp1lQ3TTP0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shcbp1lQ3TTP0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shcbp1lQ3TTP0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Shcbp1lQ3TTP0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Shcbp1lQ3TTP0 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.62■□□□□ 0.73
Shcbp1lQ3TTP0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Shcbp1lQ3TTP0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Shcbp1lQ3TTP0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Shcbp1lQ3TTP0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.62■□□□□ 0.73
Shcbp1lQ3TTP0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shcbp1lQ3TTP0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shcbp1lQ3TTP0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shcbp1lQ3TTP0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.62■□□□□ 0.73
Shcbp1lQ3TTP0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Shcbp1lQ3TTP0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shcbp1lQ3TTP0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shcbp1lQ3TTP0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shcbp1lQ3TTP0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Shcbp1lQ3TTP0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shcbp1lQ3TTP0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.61■□□□□ 0.73
Shcbp1lQ3TTP0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shcbp1lQ3TTP0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Shcbp1lQ3TTP0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shcbp1lQ3TTP0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shcbp1lQ3TTP0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Shcbp1lQ3TTP0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Shcbp1lQ3TTP0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.6■□□□□ 0.73
Shcbp1lQ3TTP0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.6■□□□□ 0.73
Shcbp1lQ3TTP0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shcbp1lQ3TTP0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shcbp1lQ3TTP0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shcbp1lQ3TTP0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shcbp1lQ3TTP0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shcbp1lQ3TTP0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shcbp1lQ3TTP0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Shcbp1lQ3TTP0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Shcbp1lQ3TTP0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shcbp1lQ3TTP0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shcbp1lQ3TTP0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shcbp1lQ3TTP0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.59■□□□□ 0.73
Shcbp1lQ3TTP0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Shcbp1lQ3TTP0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Shcbp1lQ3TTP0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shcbp1lQ3TTP0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shcbp1lQ3TTP0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.59■□□□□ 0.73
Shcbp1lQ3TTP0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shcbp1lQ3TTP0 Gm42642-201ENSMUST00000200683 355 ntBASIC19.59■□□□□ 0.73
Shcbp1lQ3TTP0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shcbp1lQ3TTP0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Shcbp1lQ3TTP0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shcbp1lQ3TTP0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shcbp1lQ3TTP0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.58■□□□□ 0.73
Shcbp1lQ3TTP0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shcbp1lQ3TTP0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Shcbp1lQ3TTP0 Gm27801-201ENSMUST00000184174 223 ntBASIC19.58■□□□□ 0.72
Shcbp1lQ3TTP0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Shcbp1lQ3TTP0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shcbp1lQ3TTP0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Shcbp1lQ3TTP0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shcbp1lQ3TTP0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Shcbp1lQ3TTP0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shcbp1lQ3TTP0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shcbp1lQ3TTP0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms