Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 MGA1YGR249W 1371 nt5.61□□□□□ -1.51
UBP3Q01477 SSZ1YHR064C 1617 nt5.61□□□□□ -1.51
UBP3Q01477 SDS3YIL084C 984 nt5.61□□□□□ -1.51
UBP3Q01477 VPS25YJR102C 609 nt5.61□□□□□ -1.51
UBP3Q01477 YMR187CYMR187C 1296 nt5.61□□□□□ -1.51
UBP3Q01477 ELA1YNL230C 1140 nt5.61□□□□□ -1.51
UBP3Q01477 YNR062CYNR062C 984 nt5.61□□□□□ -1.51
UBP3Q01477 MDY2YOL111C 639 nt5.61□□□□□ -1.51
UBP3Q01477 RER2YBR002C 861 nt5.61□□□□□ -1.51
UBP3Q01477 YOR114WYOR114W 885 nt5.61□□□□□ -1.51
UBP3Q01477 YOR238WYOR238W 912 nt5.61□□□□□ -1.51
UBP3Q01477 ETR1YBR026C 1143 nt5.61□□□□□ -1.51
UBP3Q01477 SUR1YPL057C 1149 nt5.61□□□□□ -1.51
UBP3Q01477 RPL21BYPL079W 483 nt5.61□□□□□ -1.51
UBP3Q01477 SCD6YPR129W 1050 nt5.61□□□□□ -1.51
UBP3Q01477 KCC4YCL024W 3114 nt5.61□□□□□ -1.51
UBP3Q01477 SPO1YNL012W 1896 nt5.6□□□□□ -1.51
UBP3Q01477 DUR1,2YBR208C 5508 nt5.6□□□□□ -1.51
UBP3Q01477 PDC1YLR044C 1692 nt5.6□□□□□ -1.51
UBP3Q01477 SIF2YBR103W 1608 nt5.6□□□□□ -1.51
UBP3Q01477 TAF8YML114C 1533 nt5.6□□□□□ -1.51
UBP3Q01477 SER3YER081W 1410 nt5.6□□□□□ -1.51
UBP3Q01477 YCL068CYCL068C 783 nt5.6□□□□□ -1.51
UBP3Q01477 YCR101CYCR101C 549 nt5.6□□□□□ -1.51
UBP3Q01477 CAB2YIL083C 1098 nt5.6□□□□□ -1.51
UBP3Q01477 DAL3YIR032C 588 nt5.6□□□□□ -1.51
UBP3Q01477 YJL028WYJL028W 336 nt5.6□□□□□ -1.51
UBP3Q01477 MBR1YKL093W 1020 nt5.6□□□□□ -1.51
UBP3Q01477 TEM1YML064C 738 nt5.6□□□□□ -1.51
UBP3Q01477 HUT1YPL244C 1020 nt5.6□□□□□ -1.51
UBP3Q01477 KIP2YPL155C 2121 nt5.6□□□□□ -1.51
UBP3Q01477 MSA1YOR066W 1890 nt5.6□□□□□ -1.51
UBP3Q01477 ALG2YGL065C 1512 nt5.59□□□□□ -1.51 RIP-Chip
UBP3Q01477 KIN28YDL108W 921 nt5.59□□□□□ -1.51
UBP3Q01477 SUR2YDR297W 1050 nt5.59□□□□□ -1.51
UBP3Q01477 YPT32YGL210W 669 nt5.59□□□□□ -1.51
UBP3Q01477 NAT2YGR147C 867 nt5.59□□□□□ -1.51
UBP3Q01477 PTI1YGR156W 1278 nt5.59□□□□□ -1.51 RIP-Chip
UBP3Q01477 POM33YLL023C 840 nt5.59□□□□□ -1.51
UBP3Q01477 YIM1YMR152W 1098 nt5.59□□□□□ -1.51
UBP3Q01477 WRS1YOL097C 1299 nt5.59□□□□□ -1.51
UBP3Q01477 GAL10YBR019C 2100 nt5.59□□□□□ -1.52
UBP3Q01477 ERT1YBR239C 1590 nt5.59□□□□□ -1.52 RIP-Chip
UBP3Q01477 YIL001WYIL001W 1542 nt5.58□□□□□ -1.52
UBP3Q01477 FOL1YNL256W 2475 nt5.58□□□□□ -1.52 RIP-Chip
UBP3Q01477 NAM9YNL137C 1461 nt5.58□□□□□ -1.52
UBP3Q01477 GAS4YOL132W 1416 nt5.58□□□□□ -1.52
UBP3Q01477 PXA1YPL147W 2613 nt5.58□□□□□ -1.52
UBP3Q01477 HMLALPHA2YCL067C 633 nt5.58□□□□□ -1.52
UBP3Q01477 MATALPHA2YCR039C 633 nt5.58□□□□□ -1.52
UBP3Q01477 RRP45YDR280W 918 nt5.58□□□□□ -1.52
UBP3Q01477 TLG1YDR468C 675 nt5.58□□□□□ -1.52
UBP3Q01477 ARC1YGL105W 1131 nt5.58□□□□□ -1.52 RIP-Chip
UBP3Q01477 DAM1YGR113W 1032 nt5.58□□□□□ -1.52
UBP3Q01477 PRS1YKL181W 1284 nt5.58□□□□□ -1.52
UBP3Q01477 SFH1YLR321C 1281 nt5.58□□□□□ -1.52
UBP3Q01477 YNL144W-AYNL144W-A 84 nt5.58□□□□□ -1.52
UBP3Q01477 SAM4YPL273W 978 nt5.58□□□□□ -1.52
UBP3Q01477 DCC1YCL016C 1143 nt5.58□□□□□ -1.52
UBP3Q01477 IKS1YJL057C 2004 nt5.58□□□□□ -1.52
UBP3Q01477 SAG1YJR004C 1953 nt5.58□□□□□ -1.52 RIP-Chip
UBP3Q01477 TDA3YHR009C 1572 nt5.58□□□□□ -1.52 RIP-Chip
UBP3Q01477 UBA2YDR390C 1911 nt5.58□□□□□ -1.52
UBP3Q01477 GAT2YMR136W 1683 nt5.57□□□□□ -1.52 RIP-Chip
UBP3Q01477 PST1YDR055W 1335 nt5.57□□□□□ -1.52 RIP-Chip
UBP3Q01477 YCL076WYCL076W 744 nt5.57□□□□□ -1.52
UBP3Q01477 RDI1YDL135C 609 nt5.57□□□□□ -1.52
UBP3Q01477 TGL2YDR058C 981 nt5.57□□□□□ -1.52
UBP3Q01477 GRX4YER174C 735 nt5.57□□□□□ -1.52
UBP3Q01477 RPL22BYFL034C-A 369 nt5.57□□□□□ -1.52
UBP3Q01477 YGR182CYGR182C 354 nt5.57□□□□□ -1.52
UBP3Q01477 RTA1YGR213C 954 nt5.57□□□□□ -1.52
UBP3Q01477 YJR085CYJR085C 318 nt5.57□□□□□ -1.52
UBP3Q01477 ATG38YLR211C 681 nt5.57□□□□□ -1.52
UBP3Q01477 RIF2YLR453C 1188 nt5.57□□□□□ -1.52
UBP3Q01477 YMR085WYMR085W 1299 nt5.57□□□□□ -1.52 RIP-Chip
UBP3Q01477 RPA49YNL248C 1248 nt5.57□□□□□ -1.52
UBP3Q01477 ICS2YBR157C 768 nt5.57□□□□□ -1.52
UBP3Q01477 ATE1YGL017W 1512 nt5.57□□□□□ -1.52
UBP3Q01477 SOG2YOR353C 2376 nt5.57□□□□□ -1.52
UBP3Q01477 YEL077CYEL077C 3834 nt5.56□□□□□ -1.52
UBP3Q01477 MTH1YDR277C 1302 nt5.56□□□□□ -1.52
UBP3Q01477 SUP45YBR143C 1314 nt5.56□□□□□ -1.52 RIP-Chip
UBP3Q01477 NUS1YDL193W 1128 nt5.56□□□□□ -1.52 RIP-Chip
UBP3Q01477 HSP42YDR171W 1128 nt5.56□□□□□ -1.52
UBP3Q01477 FOL2YGR267C 732 nt5.56□□□□□ -1.52
UBP3Q01477 COX6YHR051W 447 nt5.56□□□□□ -1.52
UBP3Q01477 PEX18YHR160C 852 nt5.56□□□□□ -1.52
UBP3Q01477 ARC15YIL062C 465 nt5.56□□□□□ -1.52
UBP3Q01477 DLT1YMR126C 1029 nt5.56□□□□□ -1.52
UBP3Q01477 YBL059WYBL059W 582 nt5.56□□□□□ -1.52
UBP3Q01477 IRC13YOR235W 315 nt5.56□□□□□ -1.52
UBP3Q01477 CIK1YMR198W 1785 nt5.56□□□□□ -1.52
UBP3Q01477 CDC9YDL164C 2268 nt5.56□□□□□ -1.52
UBP3Q01477 THI21YPL258C 1656 nt5.56□□□□□ -1.52
UBP3Q01477 RCK2YLR248W 1833 nt5.55□□□□□ -1.52
UBP3Q01477 BUD7YOR299W 2241 nt5.55□□□□□ -1.52
UBP3Q01477 DAK1YML070W 1755 nt5.55□□□□□ -1.52
UBP3Q01477 PET100YDR079W 336 nt5.55□□□□□ -1.52
UBP3Q01477 COQ4YDR204W 1008 nt5.55□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 87.4 ms