Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC28.43■■■□□ 2.14
KCNQ4P56696 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC28.43■■■□□ 2.14
KCNQ4P56696 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC28.43■■■□□ 2.14
KCNQ4P56696 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
KCNQ4P56696 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC28.42■■■□□ 2.14
KCNQ4P56696 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
KCNQ4P56696 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
KCNQ4P56696 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC28.42■■■□□ 2.14
KCNQ4P56696 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
KCNQ4P56696 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC28.42■■■□□ 2.14
KCNQ4P56696 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC28.42■■■□□ 2.14
KCNQ4P56696 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC28.42■■■□□ 2.14
KCNQ4P56696 AL121832.2-201ENST00000610979 668 ntBASIC28.42■■■□□ 2.14
KCNQ4P56696 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
KCNQ4P56696 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
KCNQ4P56696 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
KCNQ4P56696 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
KCNQ4P56696 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
KCNQ4P56696 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
KCNQ4P56696 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
KCNQ4P56696 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
KCNQ4P56696 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
KCNQ4P56696 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
KCNQ4P56696 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
KCNQ4P56696 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
KCNQ4P56696 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
KCNQ4P56696 MDK-213ENST00000617138 635 ntTSL 2 BASIC28.4■■■□□ 2.14
KCNQ4P56696 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
KCNQ4P56696 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
KCNQ4P56696 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
KCNQ4P56696 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
KCNQ4P56696 EI24-211ENST00000534546 1544 ntTSL 2 BASIC28.39■■■□□ 2.14
KCNQ4P56696 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC28.39■■■□□ 2.14
KCNQ4P56696 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC28.39■■■□□ 2.14
KCNQ4P56696 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
KCNQ4P56696 KRT18P11-201ENST00000435214 1283 ntBASIC28.39■■■□□ 2.14
KCNQ4P56696 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC28.39■■■□□ 2.14
KCNQ4P56696 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC28.39■■■□□ 2.14
KCNQ4P56696 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC28.39■■■□□ 2.14
KCNQ4P56696 PARP1-210ENST00000629232 477 ntTSL 5 BASIC28.39■■■□□ 2.14
KCNQ4P56696 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.39■■■□□ 2.13
KCNQ4P56696 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
KCNQ4P56696 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
KCNQ4P56696 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC28.38■■■□□ 2.13
KCNQ4P56696 METTL15-202ENST00000403099 795 ntTSL 5 BASIC28.38■■■□□ 2.13
KCNQ4P56696 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
KCNQ4P56696 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC28.38■■■□□ 2.13
KCNQ4P56696 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC28.38■■■□□ 2.13
KCNQ4P56696 SLC7A5P2-201ENST00000553010 536 ntBASIC28.38■■■□□ 2.13
KCNQ4P56696 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
KCNQ4P56696 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
KCNQ4P56696 AC004687.1-201ENST00000579003 1625 ntBASIC28.37■■■□□ 2.13
KCNQ4P56696 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
KCNQ4P56696 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
KCNQ4P56696 TFG-210ENST00000620299 1289 ntTSL 5 BASIC28.37■■■□□ 2.13
KCNQ4P56696 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
KCNQ4P56696 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC28.37■■■□□ 2.13
KCNQ4P56696 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
KCNQ4P56696 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC28.37■■■□□ 2.13
KCNQ4P56696 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
KCNQ4P56696 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
KCNQ4P56696 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
KCNQ4P56696 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
KCNQ4P56696 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
KCNQ4P56696 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
KCNQ4P56696 AC079140.4-201ENST00000507448 529 ntBASIC28.36■■■□□ 2.13
KCNQ4P56696 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC28.36■■■□□ 2.13
KCNQ4P56696 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC28.36■■■□□ 2.13
KCNQ4P56696 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
KCNQ4P56696 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
KCNQ4P56696 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
KCNQ4P56696 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
KCNQ4P56696 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
KCNQ4P56696 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
KCNQ4P56696 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
KCNQ4P56696 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
KCNQ4P56696 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
KCNQ4P56696 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
KCNQ4P56696 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
KCNQ4P56696 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC28.35■■■□□ 2.13
KCNQ4P56696 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC28.35■■■□□ 2.13
KCNQ4P56696 DET1-205ENST00000558413 583 ntTSL 4 BASIC28.35■■■□□ 2.13
KCNQ4P56696 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
KCNQ4P56696 AC022211.4-201ENST00000625094 2161 ntBASIC28.34■■■□□ 2.13
KCNQ4P56696 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
KCNQ4P56696 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
KCNQ4P56696 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
KCNQ4P56696 AC069152.1-201ENST00000438030 544 ntBASIC28.34■■■□□ 2.13
KCNQ4P56696 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC28.34■■■□□ 2.13
KCNQ4P56696 DUX4L16-201ENST00000555130 1264 ntBASIC28.34■■■□□ 2.13
KCNQ4P56696 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
KCNQ4P56696 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
KCNQ4P56696 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
KCNQ4P56696 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
KCNQ4P56696 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC28.33■■■□□ 2.13
KCNQ4P56696 AC093827.2-201ENST00000512654 315 ntBASIC28.33■■■□□ 2.13
KCNQ4P56696 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
KCNQ4P56696 AC098934.4-201ENST00000564127 592 ntBASIC28.33■■■□□ 2.13
KCNQ4P56696 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC28.33■■■□□ 2.13
KCNQ4P56696 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms