Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR2JP52435 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
POLR2JP52435 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.01■□□□□ 0.95
POLR2JP52435 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR2JP52435 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
POLR2JP52435 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
POLR2JP52435 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.01■□□□□ 0.95
POLR2JP52435 MIR6722-201ENST00000617286 78 ntBASIC21.01■□□□□ 0.95
POLR2JP52435 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.01■□□□□ 0.95
POLR2JP52435 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
POLR2JP52435 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR2JP52435 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.01■□□□□ 0.95
POLR2JP52435 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.01■□□□□ 0.95
POLR2JP52435 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR2JP52435 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
POLR2JP52435 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR2JP52435 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR2JP52435 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
POLR2JP52435 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
POLR2JP52435 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21■□□□□ 0.95
POLR2JP52435 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21■□□□□ 0.95
POLR2JP52435 AL033527.3-201ENST00000566366 1196 ntBASIC21■□□□□ 0.95
POLR2JP52435 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21■□□□□ 0.95
POLR2JP52435 AC009086.3-201ENST00000623486 1008 ntBASIC21■□□□□ 0.95
POLR2JP52435 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
POLR2JP52435 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
POLR2JP52435 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
POLR2JP52435 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
POLR2JP52435 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21■□□□□ 0.95
POLR2JP52435 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
POLR2JP52435 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
POLR2JP52435 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21■□□□□ 0.95
POLR2JP52435 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
POLR2JP52435 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
POLR2JP52435 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.99■□□□□ 0.95
POLR2JP52435 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
POLR2JP52435 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR2JP52435 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR2JP52435 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR2JP52435 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR2JP52435 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.99■□□□□ 0.95
POLR2JP52435 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.99■□□□□ 0.95
POLR2JP52435 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
POLR2JP52435 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
POLR2JP52435 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
POLR2JP52435 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR2JP52435 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.98■□□□□ 0.95
POLR2JP52435 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR2JP52435 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.98■□□□□ 0.95
POLR2JP52435 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.98■□□□□ 0.95
POLR2JP52435 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR2JP52435 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.98■□□□□ 0.95
POLR2JP52435 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR2JP52435 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR2JP52435 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2JP52435 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.97■□□□□ 0.95
POLR2JP52435 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2JP52435 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.97■□□□□ 0.95
POLR2JP52435 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2JP52435 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.97■□□□□ 0.95
POLR2JP52435 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.97■□□□□ 0.95
POLR2JP52435 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2JP52435 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2JP52435 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2JP52435 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
POLR2JP52435 DUX4L4-201ENST00000566884 1269 ntBASIC20.97■□□□□ 0.95
POLR2JP52435 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2JP52435 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
POLR2JP52435 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.97■□□□□ 0.95
POLR2JP52435 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2JP52435 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR2JP52435 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
POLR2JP52435 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR2JP52435 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
POLR2JP52435 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR2JP52435 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR2JP52435 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.96■□□□□ 0.95
POLR2JP52435 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.96■□□□□ 0.95
POLR2JP52435 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
POLR2JP52435 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR2JP52435 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.96■□□□□ 0.95
POLR2JP52435 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR2JP52435 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
POLR2JP52435 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.96■□□□□ 0.95
POLR2JP52435 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR2JP52435 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR2JP52435 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.95■□□□□ 0.94
POLR2JP52435 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR2JP52435 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR2JP52435 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR2JP52435 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR2JP52435 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.95■□□□□ 0.94
POLR2JP52435 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
POLR2JP52435 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
POLR2JP52435 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.95■□□□□ 0.94
POLR2JP52435 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.95■□□□□ 0.94
POLR2JP52435 AL031848.2-201ENST00000607670 837 ntBASIC20.95■□□□□ 0.94
POLR2JP52435 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR2JP52435 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
POLR2JP52435 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms