Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RPL3P39023 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPL3P39023 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.84■□□□□ 0.93
RPL3P39023 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPL3P39023 KRT16P3-201ENST00000439127 1283 ntBASIC20.84■□□□□ 0.93
RPL3P39023 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RPL3P39023 AL499627.2-201ENST00000606283 725 ntBASIC20.84■□□□□ 0.93
RPL3P39023 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.84■□□□□ 0.93
RPL3P39023 AC004687.1-201ENST00000579003 1625 ntBASIC20.84■□□□□ 0.93
RPL3P39023 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RPL3P39023 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
RPL3P39023 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPL3P39023 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPL3P39023 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPL3P39023 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPL3P39023 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPL3P39023 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RPL3P39023 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RPL3P39023 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPL3P39023 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPL3P39023 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPL3P39023 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPL3P39023 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPL3P39023 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPL3P39023 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPL3P39023 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPL3P39023 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPL3P39023 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPL3P39023 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPL3P39023 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPL3P39023 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
RPL3P39023 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPL3P39023 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPL3P39023 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.83■□□□□ 0.92
RPL3P39023 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.82■□□□□ 0.92
RPL3P39023 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPL3P39023 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPL3P39023 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPL3P39023 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.82■□□□□ 0.92
RPL3P39023 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.82■□□□□ 0.92
RPL3P39023 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.82■□□□□ 0.92
RPL3P39023 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPL3P39023 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPL3P39023 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RPL3P39023 AC080038.3-201ENST00000623346 1952 ntBASIC20.81■□□□□ 0.92
RPL3P39023 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPL3P39023 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RPL3P39023 LINC00565-201ENST00000562710 2331 ntBASIC20.81■□□□□ 0.92
RPL3P39023 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RPL3P39023 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPL3P39023 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.81■□□□□ 0.92
RPL3P39023 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.81■□□□□ 0.92
RPL3P39023 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPL3P39023 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPL3P39023 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.81■□□□□ 0.92
RPL3P39023 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
RPL3P39023 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPL3P39023 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPL3P39023 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RPL3P39023 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPL3P39023 AC137767.1-201ENST00000602918 1920 ntBASIC20.8■□□□□ 0.92
RPL3P39023 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.8■□□□□ 0.92
RPL3P39023 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.8■□□□□ 0.92
RPL3P39023 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RPL3P39023 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RPL3P39023 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPL3P39023 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPL3P39023 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPL3P39023 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPL3P39023 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPL3P39023 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPL3P39023 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RPL3P39023 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPL3P39023 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RPL3P39023 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPL3P39023 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.8■□□□□ 0.92
RPL3P39023 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPL3P39023 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.79■□□□□ 0.92
RPL3P39023 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPL3P39023 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPL3P39023 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.79■□□□□ 0.92
RPL3P39023 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.79■□□□□ 0.92
RPL3P39023 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPL3P39023 C11orf96-202ENST00000528572 1834 ntBASIC20.79■□□□□ 0.92
RPL3P39023 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPL3P39023 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.79■□□□□ 0.92
RPL3P39023 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RPL3P39023 AL035685.1-201ENST00000636663 812 ntBASIC20.79■□□□□ 0.92
RPL3P39023 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPL3P39023 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.79■□□□□ 0.92
RPL3P39023 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPL3P39023 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.78■□□□□ 0.92
RPL3P39023 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPL3P39023 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPL3P39023 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RPL3P39023 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.78■□□□□ 0.92
RPL3P39023 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPL3P39023 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPL3P39023 AL356740.2-201ENST00000601559 647 ntBASIC20.78■□□□□ 0.92
RPL3P39023 CA15P2-201ENST00000611168 834 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms