Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 EI24-211ENST00000534546 1544 ntTSL 2 BASIC27.45■■□□□ 1.98
PDE6BP35913 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC27.45■■□□□ 1.98
PDE6BP35913 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
PDE6BP35913 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
PDE6BP35913 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PDE6BP35913 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PDE6BP35913 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
PDE6BP35913 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC27.44■■□□□ 1.98
PDE6BP35913 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
PDE6BP35913 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC27.44■■□□□ 1.98
PDE6BP35913 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PDE6BP35913 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PDE6BP35913 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC27.43■■□□□ 1.98
PDE6BP35913 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PDE6BP35913 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PDE6BP35913 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PDE6BP35913 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PDE6BP35913 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PDE6BP35913 AC010141.3-201ENST00000456659 717 ntBASIC27.43■■□□□ 1.98
PDE6BP35913 CD99P1-205ENST00000527459 561 ntBASIC27.43■■□□□ 1.98
PDE6BP35913 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC27.43■■□□□ 1.98
PDE6BP35913 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC27.43■■□□□ 1.98
PDE6BP35913 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC27.43■■□□□ 1.98
PDE6BP35913 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
PDE6BP35913 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
PDE6BP35913 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC27.42■■□□□ 1.98
PDE6BP35913 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PDE6BP35913 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC27.42■■□□□ 1.98
PDE6BP35913 AC079140.4-201ENST00000507448 529 ntBASIC27.42■■□□□ 1.98
PDE6BP35913 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PDE6BP35913 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
PDE6BP35913 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PDE6BP35913 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC27.41■■□□□ 1.98
PDE6BP35913 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
PDE6BP35913 AC004687.1-201ENST00000579003 1625 ntBASIC27.41■■□□□ 1.98
PDE6BP35913 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PDE6BP35913 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
PDE6BP35913 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
PDE6BP35913 AC142086.2-201ENST00000569753 217 ntBASIC27.4■■□□□ 1.98
PDE6BP35913 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
PDE6BP35913 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PDE6BP35913 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
PDE6BP35913 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
PDE6BP35913 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
PDE6BP35913 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
PDE6BP35913 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC27.39■■□□□ 1.98
PDE6BP35913 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
PDE6BP35913 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.98
PDE6BP35913 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC27.39■■□□□ 1.98
PDE6BP35913 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC27.39■■□□□ 1.98
PDE6BP35913 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
PDE6BP35913 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
PDE6BP35913 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.98
PDE6BP35913 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC27.39■■□□□ 1.98
PDE6BP35913 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC27.38■■□□□ 1.97
PDE6BP35913 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC27.38■■□□□ 1.97
PDE6BP35913 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
PDE6BP35913 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PDE6BP35913 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC27.38■■□□□ 1.97
PDE6BP35913 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PDE6BP35913 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC27.37■■□□□ 1.97
PDE6BP35913 APTR-205ENST00000447009 902 ntTSL 2 BASIC27.37■■□□□ 1.97
PDE6BP35913 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC27.37■■□□□ 1.97
PDE6BP35913 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC27.37■■□□□ 1.97
PDE6BP35913 GAMT-205ENST00000640762 751 ntTSL 5 BASIC27.37■■□□□ 1.97
PDE6BP35913 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PDE6BP35913 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC27.37■■□□□ 1.97
PDE6BP35913 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PDE6BP35913 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
PDE6BP35913 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
PDE6BP35913 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PDE6BP35913 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
PDE6BP35913 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
PDE6BP35913 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PDE6BP35913 MFSD11-216ENST00000590393 1141 ntBASIC27.36■■□□□ 1.97
PDE6BP35913 AL121832.2-201ENST00000610979 668 ntBASIC27.36■■□□□ 1.97
PDE6BP35913 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC27.36■■□□□ 1.97
PDE6BP35913 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PDE6BP35913 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
PDE6BP35913 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PDE6BP35913 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PDE6BP35913 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
PDE6BP35913 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
PDE6BP35913 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
PDE6BP35913 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PDE6BP35913 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC27.35■■□□□ 1.97
PDE6BP35913 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
PDE6BP35913 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC27.35■■□□□ 1.97
PDE6BP35913 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
PDE6BP35913 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
PDE6BP35913 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC27.35■■□□□ 1.97
PDE6BP35913 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.34■■□□□ 1.97
PDE6BP35913 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
PDE6BP35913 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC27.34■■□□□ 1.97
PDE6BP35913 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC27.34■■□□□ 1.97
PDE6BP35913 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PDE6BP35913 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PDE6BP35913 AC083906.2-201ENST00000511578 360 ntBASIC27.33■■□□□ 1.97
PDE6BP35913 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PDE6BP35913 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms