Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
COL1A1P02452 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.76■■□□□ 1.87
COL1A1P02452 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.76■■□□□ 1.87
COL1A1P02452 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.76■■□□□ 1.87
COL1A1P02452 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
COL1A1P02452 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
COL1A1P02452 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
COL1A1P02452 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.76■■□□□ 1.87
COL1A1P02452 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
COL1A1P02452 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.76■■□□□ 1.87
COL1A1P02452 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
COL1A1P02452 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.75■■□□□ 1.87
COL1A1P02452 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
COL1A1P02452 EI24-211ENST00000534546 1544 ntTSL 2 BASIC26.75■■□□□ 1.87
COL1A1P02452 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
COL1A1P02452 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.74■■□□□ 1.87
COL1A1P02452 KRT18P61-201ENST00000585825 1298 ntBASIC26.74■■□□□ 1.87
COL1A1P02452 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
COL1A1P02452 AC092068.2-201ENST00000590491 1708 ntBASIC26.74■■□□□ 1.87
COL1A1P02452 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC26.74■■□□□ 1.87
COL1A1P02452 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL1A1P02452 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC26.73■■□□□ 1.87
COL1A1P02452 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.73■■□□□ 1.87
COL1A1P02452 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC26.73■■□□□ 1.87
COL1A1P02452 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.73■■□□□ 1.87
COL1A1P02452 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.72■■□□□ 1.87
COL1A1P02452 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
COL1A1P02452 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
COL1A1P02452 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.72■■□□□ 1.87
COL1A1P02452 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL1A1P02452 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC26.72■■□□□ 1.87
COL1A1P02452 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
COL1A1P02452 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
COL1A1P02452 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.72■■□□□ 1.87
COL1A1P02452 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC26.72■■□□□ 1.87
COL1A1P02452 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
COL1A1P02452 AC105233.4-201ENST00000642045 216 ntBASIC26.72■■□□□ 1.87
COL1A1P02452 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL1A1P02452 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.71■■□□□ 1.87
COL1A1P02452 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.71■■□□□ 1.87
COL1A1P02452 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL1A1P02452 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL1A1P02452 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL1A1P02452 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL1A1P02452 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC26.71■■□□□ 1.87
COL1A1P02452 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.71■■□□□ 1.87
COL1A1P02452 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC26.71■■□□□ 1.87
COL1A1P02452 TPRG1LP1-201ENST00000598702 760 ntBASIC26.71■■□□□ 1.87
COL1A1P02452 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL1A1P02452 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.71■■□□□ 1.87
COL1A1P02452 LINC02228-203ENST00000641970 1355 ntBASIC26.71■■□□□ 1.87
COL1A1P02452 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL1A1P02452 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
COL1A1P02452 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.7■■□□□ 1.87
COL1A1P02452 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC26.7■■□□□ 1.87
COL1A1P02452 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
COL1A1P02452 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.7■■□□□ 1.87
COL1A1P02452 GXYLT1P2-201ENST00000433312 1230 ntBASIC26.7■■□□□ 1.87
COL1A1P02452 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
COL1A1P02452 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
COL1A1P02452 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC26.7■■□□□ 1.87
COL1A1P02452 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.7■■□□□ 1.86
COL1A1P02452 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
COL1A1P02452 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.7■■□□□ 1.86
COL1A1P02452 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
COL1A1P02452 NTF6G-201ENST00000591094 616 ntBASIC26.69■■□□□ 1.86
COL1A1P02452 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL1A1P02452 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
COL1A1P02452 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.69■■□□□ 1.86
COL1A1P02452 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL1A1P02452 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.68■■□□□ 1.86
COL1A1P02452 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.68■■□□□ 1.86
COL1A1P02452 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.68■■□□□ 1.86
COL1A1P02452 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.68■■□□□ 1.86
COL1A1P02452 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COL1A1P02452 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COL1A1P02452 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL1A1P02452 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.68■■□□□ 1.86
COL1A1P02452 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
COL1A1P02452 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.68■■□□□ 1.86
COL1A1P02452 DENND3-207ENST00000518347 850 ntTSL 2 BASIC26.68■■□□□ 1.86
COL1A1P02452 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COL1A1P02452 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COL1A1P02452 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.67■■□□□ 1.86
COL1A1P02452 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL1A1P02452 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.67■■□□□ 1.86
COL1A1P02452 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.67■■□□□ 1.86
COL1A1P02452 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
COL1A1P02452 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.67■■□□□ 1.86
COL1A1P02452 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
COL1A1P02452 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC26.67■■□□□ 1.86
COL1A1P02452 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC26.67■■□□□ 1.86
COL1A1P02452 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
COL1A1P02452 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
COL1A1P02452 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL1A1P02452 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
COL1A1P02452 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC26.66■■□□□ 1.86
COL1A1P02452 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL1A1P02452 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
COL1A1P02452 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms