Protein–RNA interactions for Protein: O55229

Chkb, Choline/ethanolamine kinase, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkbO55229 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ChkbO55229 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ChkbO55229 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ChkbO55229 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ChkbO55229 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ChkbO55229 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.72■□□□□ 0.91
ChkbO55229 Gm22238-201ENSMUST00000175222 88 ntBASIC20.72■□□□□ 0.91
ChkbO55229 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ChkbO55229 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ChkbO55229 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ChkbO55229 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.72■□□□□ 0.91
ChkbO55229 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ChkbO55229 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ChkbO55229 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ChkbO55229 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ChkbO55229 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ChkbO55229 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ChkbO55229 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ChkbO55229 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ChkbO55229 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ChkbO55229 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ChkbO55229 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ChkbO55229 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ChkbO55229 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ChkbO55229 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.71■□□□□ 0.91
ChkbO55229 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ChkbO55229 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ChkbO55229 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ChkbO55229 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ChkbO55229 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ChkbO55229 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ChkbO55229 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
ChkbO55229 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ChkbO55229 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ChkbO55229 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.7■□□□□ 0.9
ChkbO55229 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
ChkbO55229 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ChkbO55229 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ChkbO55229 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ChkbO55229 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ChkbO55229 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ChkbO55229 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ChkbO55229 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ChkbO55229 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ChkbO55229 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ChkbO55229 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ChkbO55229 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ChkbO55229 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ChkbO55229 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ChkbO55229 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ChkbO55229 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ChkbO55229 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.68■□□□□ 0.9
ChkbO55229 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ChkbO55229 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.68■□□□□ 0.9
ChkbO55229 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ChkbO55229 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ChkbO55229 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.67■□□□□ 0.9
ChkbO55229 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ChkbO55229 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.67■□□□□ 0.9
ChkbO55229 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ChkbO55229 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ChkbO55229 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ChkbO55229 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ChkbO55229 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ChkbO55229 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ChkbO55229 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ChkbO55229 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ChkbO55229 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ChkbO55229 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.66■□□□□ 0.9
ChkbO55229 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.66■□□□□ 0.9
ChkbO55229 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ChkbO55229 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ChkbO55229 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ChkbO55229 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ChkbO55229 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ChkbO55229 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
ChkbO55229 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ChkbO55229 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ChkbO55229 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ChkbO55229 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.65■□□□□ 0.9
ChkbO55229 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ChkbO55229 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ChkbO55229 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ChkbO55229 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ChkbO55229 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ChkbO55229 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.65■□□□□ 0.9
ChkbO55229 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ChkbO55229 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.65■□□□□ 0.9
ChkbO55229 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ChkbO55229 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ChkbO55229 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ChkbO55229 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.9
ChkbO55229 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ChkbO55229 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
ChkbO55229 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ChkbO55229 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
ChkbO55229 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ChkbO55229 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ChkbO55229 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.63■□□□□ 0.89
ChkbO55229 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms