Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC34.34■■■■□ 3.09
PLEKHD1A6NEE1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC34.34■■■■□ 3.09
PLEKHD1A6NEE1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC34.34■■■■□ 3.09
PLEKHD1A6NEE1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
PLEKHD1A6NEE1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
PLEKHD1A6NEE1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
PLEKHD1A6NEE1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
PLEKHD1A6NEE1 ESRRAP2-201ENST00000418437 1549 ntBASIC34.33■■■■□ 3.09
PLEKHD1A6NEE1 AC004687.1-201ENST00000579003 1625 ntBASIC34.33■■■■□ 3.09
PLEKHD1A6NEE1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC34.32■■■■□ 3.09
PLEKHD1A6NEE1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
PLEKHD1A6NEE1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC34.32■■■■□ 3.08
PLEKHD1A6NEE1 MIR663A-201ENST00000385250 93 ntBASIC34.32■■■■□ 3.08
PLEKHD1A6NEE1 AC010141.3-201ENST00000456659 717 ntBASIC34.32■■■■□ 3.08
PLEKHD1A6NEE1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC34.32■■■■□ 3.08
PLEKHD1A6NEE1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
PLEKHD1A6NEE1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
PLEKHD1A6NEE1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC34.32■■■■□ 3.08
PLEKHD1A6NEE1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC34.32■■■■□ 3.08
PLEKHD1A6NEE1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC34.31■■■■□ 3.08
PLEKHD1A6NEE1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
PLEKHD1A6NEE1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
PLEKHD1A6NEE1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC34.31■■■■□ 3.08
PLEKHD1A6NEE1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC34.31■■■■□ 3.08
PLEKHD1A6NEE1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC34.31■■■■□ 3.08
PLEKHD1A6NEE1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC34.31■■■■□ 3.08
PLEKHD1A6NEE1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
PLEKHD1A6NEE1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
PLEKHD1A6NEE1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
PLEKHD1A6NEE1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC34.3■■■■□ 3.08
PLEKHD1A6NEE1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC34.3■■■■□ 3.08
PLEKHD1A6NEE1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC34.3■■■■□ 3.08
PLEKHD1A6NEE1 GPX1P1-201ENST00000388829 606 ntBASIC34.3■■■■□ 3.08
PLEKHD1A6NEE1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC34.3■■■■□ 3.08
PLEKHD1A6NEE1 MDK-213ENST00000617138 635 ntTSL 2 BASIC34.3■■■■□ 3.08
PLEKHD1A6NEE1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
PLEKHD1A6NEE1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC34.3■■■■□ 3.08
PLEKHD1A6NEE1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
PLEKHD1A6NEE1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
PLEKHD1A6NEE1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
PLEKHD1A6NEE1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
PLEKHD1A6NEE1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
PLEKHD1A6NEE1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC34.3■■■■□ 3.08
PLEKHD1A6NEE1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC34.29■■■■□ 3.08
PLEKHD1A6NEE1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
PLEKHD1A6NEE1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC34.29■■■■□ 3.08
PLEKHD1A6NEE1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC34.28■■■■□ 3.08
PLEKHD1A6NEE1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
PLEKHD1A6NEE1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC34.28■■■■□ 3.08
PLEKHD1A6NEE1 AC087239.1-201ENST00000622671 572 ntBASIC34.28■■■■□ 3.08
PLEKHD1A6NEE1 TMEM191A-211ENST00000637163 1067 ntBASIC34.28■■■■□ 3.08
PLEKHD1A6NEE1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC34.28■■■■□ 3.08
PLEKHD1A6NEE1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
PLEKHD1A6NEE1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
PLEKHD1A6NEE1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
PLEKHD1A6NEE1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC34.27■■■■□ 3.08
PLEKHD1A6NEE1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
PLEKHD1A6NEE1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC34.27■■■■□ 3.08
PLEKHD1A6NEE1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC34.27■■■■□ 3.08
PLEKHD1A6NEE1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC34.27■■■■□ 3.08
PLEKHD1A6NEE1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC34.27■■■■□ 3.08
PLEKHD1A6NEE1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC34.27■■■■□ 3.08
PLEKHD1A6NEE1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
PLEKHD1A6NEE1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
PLEKHD1A6NEE1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC34.26■■■■□ 3.08
PLEKHD1A6NEE1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC34.26■■■■□ 3.08
PLEKHD1A6NEE1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC34.26■■■■□ 3.08
PLEKHD1A6NEE1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
PLEKHD1A6NEE1 AC079140.4-201ENST00000507448 529 ntBASIC34.26■■■■□ 3.08
PLEKHD1A6NEE1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC34.26■■■■□ 3.08
PLEKHD1A6NEE1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC34.25■■■■□ 3.07
PLEKHD1A6NEE1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
PLEKHD1A6NEE1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC34.24■■■■□ 3.07
PLEKHD1A6NEE1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC34.24■■■■□ 3.07
PLEKHD1A6NEE1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
PLEKHD1A6NEE1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
PLEKHD1A6NEE1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC34.24■■■■□ 3.07
PLEKHD1A6NEE1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC34.24■■■■□ 3.07
PLEKHD1A6NEE1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC34.24■■■■□ 3.07
PLEKHD1A6NEE1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
PLEKHD1A6NEE1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
PLEKHD1A6NEE1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
PLEKHD1A6NEE1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC34.23■■■■□ 3.07
PLEKHD1A6NEE1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC34.23■■■■□ 3.07
PLEKHD1A6NEE1 AC142086.2-201ENST00000569753 217 ntBASIC34.23■■■■□ 3.07
PLEKHD1A6NEE1 AC138932.3-201ENST00000567634 1902 ntBASIC34.23■■■■□ 3.07
PLEKHD1A6NEE1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC34.23■■■■□ 3.07
PLEKHD1A6NEE1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC34.23■■■■□ 3.07
PLEKHD1A6NEE1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC34.22■■■■□ 3.07
PLEKHD1A6NEE1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
PLEKHD1A6NEE1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC34.22■■■■□ 3.07
PLEKHD1A6NEE1 MFSD11-216ENST00000590393 1141 ntBASIC34.22■■■■□ 3.07
PLEKHD1A6NEE1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
PLEKHD1A6NEE1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC34.22■■■■□ 3.07
PLEKHD1A6NEE1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC34.22■■■■□ 3.07
PLEKHD1A6NEE1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
PLEKHD1A6NEE1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
PLEKHD1A6NEE1 AC079630.1-202ENST00000618127 1840 ntBASIC34.21■■■■□ 3.07
PLEKHD1A6NEE1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
PLEKHD1A6NEE1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC34.21■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms