Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4n-4A0A075B615 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4n-4A0A075B615 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4n-4A0A075B615 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4n-4A0A075B615 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav4n-4A0A075B615 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav4n-4A0A075B615 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4n-4A0A075B615 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav4n-4A0A075B615 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4n-4A0A075B615 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav4n-4A0A075B615 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4n-4A0A075B615 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4n-4A0A075B615 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.58□□□□□ -0.24
Trav4n-4A0A075B615 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4n-4A0A075B615 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trav4n-4A0A075B615 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4n-4A0A075B615 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4n-4A0A075B615 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4n-4A0A075B615 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav4n-4A0A075B615 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4n-4A0A075B615 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav4n-4A0A075B615 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4n-4A0A075B615 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4n-4A0A075B615 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4n-4A0A075B615 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4n-4A0A075B615 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4n-4A0A075B615 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4n-4A0A075B615 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav4n-4A0A075B615 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav4n-4A0A075B615 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4n-4A0A075B615 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4n-4A0A075B615 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4n-4A0A075B615 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4n-4A0A075B615 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4n-4A0A075B615 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4n-4A0A075B615 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4n-4A0A075B615 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4n-4A0A075B615 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4n-4A0A075B615 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav4n-4A0A075B615 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4n-4A0A075B615 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4n-4A0A075B615 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4n-4A0A075B615 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav4n-4A0A075B615 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav4n-4A0A075B615 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav4n-4A0A075B615 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4n-4A0A075B615 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav4n-4A0A075B615 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.56□□□□□ -0.24
Trav4n-4A0A075B615 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4n-4A0A075B615 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4n-4A0A075B615 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4n-4A0A075B615 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4n-4A0A075B615 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4n-4A0A075B615 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav4n-4A0A075B615 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4n-4A0A075B615 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4n-4A0A075B615 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4n-4A0A075B615 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4n-4A0A075B615 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.56□□□□□ -0.24
Trav4n-4A0A075B615 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav4n-4A0A075B615 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav4n-4A0A075B615 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4n-4A0A075B615 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4n-4A0A075B615 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav4n-4A0A075B615 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4n-4A0A075B615 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4n-4A0A075B615 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4n-4A0A075B615 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC13.55□□□□□ -0.24
Trav4n-4A0A075B615 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4n-4A0A075B615 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4n-4A0A075B615 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav4n-4A0A075B615 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav4n-4A0A075B615 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4n-4A0A075B615 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4n-4A0A075B615 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4n-4A0A075B615 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4n-4A0A075B615 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4n-4A0A075B615 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4n-4A0A075B615 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4n-4A0A075B615 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4n-4A0A075B615 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4n-4A0A075B615 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4n-4A0A075B615 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4n-4A0A075B615 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4n-4A0A075B615 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4n-4A0A075B615 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4n-4A0A075B615 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4n-4A0A075B615 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4n-4A0A075B615 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4n-4A0A075B615 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 BC021767-201ENSMUST00000126387 1716 ntBASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms