Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 OR2T32P-201ENST00000403423 963 ntBASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 HNRNPA1P10-201ENST00000444945 962 ntBASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 MIR4254-201ENST00000581063 76 ntBASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 STK16-202ENST00000409260 1493 ntTSL 5 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 DLX4-206ENST00000611342 1662 ntBASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 AC115284.2-201ENST00000624646 2054 ntBASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 AC104758.3-203ENST00000562938 2123 ntBASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NPIPA3F8WFD2 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 FAM226B-201ENST00000602508 1490 ntBASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 AC107918.4-201ENST00000641966 3141 ntBASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 HIST1H2APS2-201ENST00000454426 370 ntBASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 AL137779.3-201ENST00000553295 729 ntBASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 BMF-206ENST00000558774 671 ntTSL 3 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 DUT-207ENST00000559416 635 ntTSL 2 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 AC027139.1-201ENST00000565286 951 ntBASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 ANKRD26P1-203ENST00000569528 966 ntBASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 AC006116.2-201ENST00000589958 988 ntBASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 MDC1-209ENST00000613547 830 ntTSL 5 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 AC020922.4-201ENST00000621389 339 ntBASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NPIPA3F8WFD2 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms