Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC14.21□□□□□ -0.13
SSR1P43307 GZF1-201ENST00000338121 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC14.21□□□□□ -0.13
SSR1P43307 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC14.21□□□□□ -0.13
SSR1P43307 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SSR1P43307 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 AL022323.5-201ENST00000624101 2059 ntBASIC14.21□□□□□ -0.13
SSR1P43307 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC14.21□□□□□ -0.13
SSR1P43307 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SSR1P43307 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC14.21□□□□□ -0.13
SSR1P43307 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SSR1P43307 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SSR1P43307 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 AL627422.1-201ENST00000434104 580 ntBASIC14.21□□□□□ -0.13
SSR1P43307 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.21□□□□□ -0.13
SSR1P43307 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.21□□□□□ -0.13
SSR1P43307 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC14.21□□□□□ -0.13
SSR1P43307 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.21□□□□□ -0.13
SSR1P43307 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.21□□□□□ -0.13
SSR1P43307 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 AL137779.3-201ENST00000553295 729 ntBASIC14.21□□□□□ -0.13
SSR1P43307 MIR2392-201ENST00000584881 84 ntBASIC14.21□□□□□ -0.13
SSR1P43307 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
SSR1P43307 AC091812.3-201ENST00000621362 345 ntBASIC14.21□□□□□ -0.13
SSR1P43307 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.21□□□□□ -0.13
SSR1P43307 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.21□□□□□ -0.13
SSR1P43307 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC14.21□□□□□ -0.13
SSR1P43307 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC14.21□□□□□ -0.13
SSR1P43307 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 AC117503.4-201ENST00000623229 1418 ntBASIC14.21□□□□□ -0.13
SSR1P43307 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSR1P43307 AC092028.1-202ENST00000641483 3547 ntBASIC14.21□□□□□ -0.14
SSR1P43307 AC092028.1-201ENST00000641781 3540 ntBASIC14.21□□□□□ -0.14
SSR1P43307 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SSR1P43307 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SSR1P43307 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SSR1P43307 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SSR1P43307 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SSR1P43307 DNM3-206ENST00000520906 4454 ntTSL 2 BASIC14.21□□□□□ -0.14
SSR1P43307 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SSR1P43307 KCTD7-209ENST00000640385 4118 ntTSL 5 BASIC14.21□□□□□ -0.14
SSR1P43307 AL450468.2-201ENST00000565955 1889 ntBASIC14.21□□□□□ -0.14
SSR1P43307 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC14.21□□□□□ -0.14
SSR1P43307 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC14.2□□□□□ -0.14
SSR1P43307 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR1P43307 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
SSR1P43307 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR1P43307 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR1P43307 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR1P43307 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SSR1P43307 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR1P43307 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC14.2□□□□□ -0.14
SSR1P43307 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC14.2□□□□□ -0.14
SSR1P43307 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.2□□□□□ -0.14
SSR1P43307 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR1P43307 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSR1P43307 PER1-202ENST00000354903 3115 ntTSL 2 BASIC14.2□□□□□ -0.14
SSR1P43307 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC14.2□□□□□ -0.14
SSR1P43307 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR1P43307 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC14.2□□□□□ -0.14
SSR1P43307 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SSR1P43307 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SSR1P43307 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC14.2□□□□□ -0.14
SSR1P43307 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.2□□□□□ -0.14
SSR1P43307 SSR4-202ENST00000370085 526 ntTSL 2 BASIC14.2□□□□□ -0.14
SSR1P43307 AL662890.1-201ENST00000396818 632 ntBASIC14.2□□□□□ -0.14
SSR1P43307 RN7SKP109-201ENST00000410592 316 ntBASIC14.2□□□□□ -0.14
SSR1P43307 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.2□□□□□ -0.14
SSR1P43307 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.2□□□□□ -0.14
SSR1P43307 IGHJ2P-201ENST00000454480 60 ntBASIC14.2□□□□□ -0.14
SSR1P43307 CEP164P1-201ENST00000455142 418 ntBASIC14.2□□□□□ -0.14
SSR1P43307 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
SSR1P43307 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.2□□□□□ -0.14
SSR1P43307 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.2□□□□□ -0.14
SSR1P43307 DNM1P51-201ENST00000558149 522 ntBASIC14.2□□□□□ -0.14
SSR1P43307 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.2□□□□□ -0.14
SSR1P43307 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.2□□□□□ -0.14
SSR1P43307 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms