Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.25■□□□□ 0.83
LRFN1Q9P244 AC012414.1-201ENST00000556676 535 ntBASIC20.25■□□□□ 0.83
LRFN1Q9P244 AL354811.1-201ENST00000610286 706 ntBASIC20.25■□□□□ 0.83
LRFN1Q9P244 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LRFN1Q9P244 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LRFN1Q9P244 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LRFN1Q9P244 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRFN1Q9P244 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRFN1Q9P244 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN1Q9P244 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN1Q9P244 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LRFN1Q9P244 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.24■□□□□ 0.83
LRFN1Q9P244 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN1Q9P244 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN1Q9P244 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN1Q9P244 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN1Q9P244 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.24■□□□□ 0.83
LRFN1Q9P244 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.24■□□□□ 0.83
LRFN1Q9P244 YBX1P1-201ENST00000445822 960 ntBASIC20.24■□□□□ 0.83
LRFN1Q9P244 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
LRFN1Q9P244 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRFN1Q9P244 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
LRFN1Q9P244 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LRFN1Q9P244 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.24■□□□□ 0.83
LRFN1Q9P244 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN1Q9P244 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN1Q9P244 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN1Q9P244 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN1Q9P244 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN1Q9P244 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.23■□□□□ 0.83
LRFN1Q9P244 AL162430.1-201ENST00000480705 870 ntBASIC20.23■□□□□ 0.83
LRFN1Q9P244 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN1Q9P244 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN1Q9P244 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.23■□□□□ 0.83
LRFN1Q9P244 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
LRFN1Q9P244 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LRFN1Q9P244 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRFN1Q9P244 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN1Q9P244 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
LRFN1Q9P244 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.22■□□□□ 0.83
LRFN1Q9P244 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN1Q9P244 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.22■□□□□ 0.83
LRFN1Q9P244 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN1Q9P244 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN1Q9P244 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN1Q9P244 AC027612.3-201ENST00000413684 1047 ntBASIC20.22■□□□□ 0.83
LRFN1Q9P244 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN1Q9P244 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.22■□□□□ 0.83
LRFN1Q9P244 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.22■□□□□ 0.83
LRFN1Q9P244 MIR6084-201ENST00000622012 110 ntBASIC20.22■□□□□ 0.83
LRFN1Q9P244 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN1Q9P244 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN1Q9P244 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN1Q9P244 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRFN1Q9P244 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.21■□□□□ 0.83
LRFN1Q9P244 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRFN1Q9P244 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRFN1Q9P244 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRFN1Q9P244 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRFN1Q9P244 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.21■□□□□ 0.83
LRFN1Q9P244 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRFN1Q9P244 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.21■□□□□ 0.83
LRFN1Q9P244 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.21■□□□□ 0.83
LRFN1Q9P244 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LRFN1Q9P244 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.21■□□□□ 0.83
LRFN1Q9P244 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LRFN1Q9P244 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRFN1Q9P244 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
LRFN1Q9P244 AC034268.1-201ENST00000441047 882 ntBASIC20.2■□□□□ 0.82
LRFN1Q9P244 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRFN1Q9P244 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.2■□□□□ 0.82
LRFN1Q9P244 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LRFN1Q9P244 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRFN1Q9P244 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRFN1Q9P244 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.2■□□□□ 0.82
LRFN1Q9P244 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRFN1Q9P244 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRFN1Q9P244 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRFN1Q9P244 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRFN1Q9P244 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LRFN1Q9P244 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.19■□□□□ 0.82
LRFN1Q9P244 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRFN1Q9P244 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.19■□□□□ 0.82
LRFN1Q9P244 AC068587.7-201ENST00000641602 218 ntBASIC20.19■□□□□ 0.82
LRFN1Q9P244 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRFN1Q9P244 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRFN1Q9P244 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRFN1Q9P244 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.18■□□□□ 0.82
LRFN1Q9P244 AC123595.1-201ENST00000440769 1046 ntBASIC20.18■□□□□ 0.82
LRFN1Q9P244 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRFN1Q9P244 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.18■□□□□ 0.82
LRFN1Q9P244 AC105233.4-201ENST00000642045 216 ntBASIC20.18■□□□□ 0.82
LRFN1Q9P244 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRFN1Q9P244 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRFN1Q9P244 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.18■□□□□ 0.82
LRFN1Q9P244 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRFN1Q9P244 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRFN1Q9P244 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.18■□□□□ 0.82
LRFN1Q9P244 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.17■□□□□ 0.82
LRFN1Q9P244 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms