Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.66■□□□□ 0.58
FOXC2Q99958 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.66■□□□□ 0.58
FOXC2Q99958 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.66■□□□□ 0.58
FOXC2Q99958 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.66■□□□□ 0.58
FOXC2Q99958 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.66■□□□□ 0.58
FOXC2Q99958 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXC2Q99958 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXC2Q99958 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
FOXC2Q99958 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
FOXC2Q99958 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXC2Q99958 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FOXC2Q99958 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.65■□□□□ 0.58
FOXC2Q99958 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
FOXC2Q99958 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.65■□□□□ 0.58
FOXC2Q99958 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
FOXC2Q99958 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXC2Q99958 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXC2Q99958 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXC2Q99958 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXC2Q99958 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.65■□□□□ 0.58
FOXC2Q99958 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXC2Q99958 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
FOXC2Q99958 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXC2Q99958 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.65■□□□□ 0.58
FOXC2Q99958 AC231657.2-201ENST00000624556 255 ntBASIC18.65■□□□□ 0.58
FOXC2Q99958 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
FOXC2Q99958 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXC2Q99958 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXC2Q99958 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
FOXC2Q99958 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
FOXC2Q99958 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXC2Q99958 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXC2Q99958 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXC2Q99958 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FOXC2Q99958 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXC2Q99958 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.64■□□□□ 0.57
FOXC2Q99958 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FOXC2Q99958 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.64■□□□□ 0.57
FOXC2Q99958 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.64■□□□□ 0.57
FOXC2Q99958 MIR4651-201ENST00000582622 73 ntBASIC18.64■□□□□ 0.57
FOXC2Q99958 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXC2Q99958 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FOXC2Q99958 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.64■□□□□ 0.57
FOXC2Q99958 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
FOXC2Q99958 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
FOXC2Q99958 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXC2Q99958 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXC2Q99958 SLC29A4P1-201ENST00000398760 971 ntBASIC18.63■□□□□ 0.57
FOXC2Q99958 SLC7A5P2-201ENST00000553010 536 ntBASIC18.63■□□□□ 0.57
FOXC2Q99958 AL050303.2-201ENST00000619798 666 ntBASIC18.63■□□□□ 0.57
FOXC2Q99958 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.63■□□□□ 0.57
FOXC2Q99958 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.63■□□□□ 0.57
FOXC2Q99958 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXC2Q99958 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.63■□□□□ 0.57
FOXC2Q99958 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.63■□□□□ 0.57
FOXC2Q99958 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
FOXC2Q99958 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
FOXC2Q99958 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXC2Q99958 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.62■□□□□ 0.57
FOXC2Q99958 GUSBP6-202ENST00000438529 1198 ntBASIC18.62■□□□□ 0.57
FOXC2Q99958 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.62■□□□□ 0.57
FOXC2Q99958 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.62■□□□□ 0.57
FOXC2Q99958 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.62■□□□□ 0.57
FOXC2Q99958 MFSD11-216ENST00000590393 1141 ntBASIC18.62■□□□□ 0.57
FOXC2Q99958 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
FOXC2Q99958 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXC2Q99958 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
FOXC2Q99958 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXC2Q99958 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXC2Q99958 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXC2Q99958 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.62■□□□□ 0.57
FOXC2Q99958 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXC2Q99958 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXC2Q99958 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXC2Q99958 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXC2Q99958 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXC2Q99958 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.61■□□□□ 0.57
FOXC2Q99958 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXC2Q99958 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
FOXC2Q99958 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXC2Q99958 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXC2Q99958 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXC2Q99958 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXC2Q99958 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.61■□□□□ 0.57
FOXC2Q99958 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.61■□□□□ 0.57
FOXC2Q99958 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXC2Q99958 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
FOXC2Q99958 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXC2Q99958 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.61■□□□□ 0.57
FOXC2Q99958 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXC2Q99958 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.61■□□□□ 0.57
FOXC2Q99958 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.61■□□□□ 0.57
FOXC2Q99958 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXC2Q99958 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXC2Q99958 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXC2Q99958 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXC2Q99958 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXC2Q99958 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXC2Q99958 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXC2Q99958 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms