Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.8■□□□□ 0.44
Col6a6Q8C6K9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a6Q8C6K9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a6Q8C6K9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.8■□□□□ 0.44
Col6a6Q8C6K9 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.8■□□□□ 0.44
Col6a6Q8C6K9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a6Q8C6K9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Col6a6Q8C6K9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a6Q8C6K9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a6Q8C6K9 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.8■□□□□ 0.44
Col6a6Q8C6K9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a6Q8C6K9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.79■□□□□ 0.44
Col6a6Q8C6K9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col6a6Q8C6K9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col6a6Q8C6K9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col6a6Q8C6K9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col6a6Q8C6K9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Col6a6Q8C6K9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col6a6Q8C6K9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col6a6Q8C6K9 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.79■□□□□ 0.44
Col6a6Q8C6K9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col6a6Q8C6K9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col6a6Q8C6K9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col6a6Q8C6K9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col6a6Q8C6K9 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.78■□□□□ 0.44
Col6a6Q8C6K9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Col6a6Q8C6K9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.78■□□□□ 0.44
Col6a6Q8C6K9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col6a6Q8C6K9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Col6a6Q8C6K9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.78■□□□□ 0.44
Col6a6Q8C6K9 Gm5408-201ENSMUST00000197998 747 ntBASIC17.78■□□□□ 0.44
Col6a6Q8C6K9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col6a6Q8C6K9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Col6a6Q8C6K9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col6a6Q8C6K9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col6a6Q8C6K9 Gm13168-201ENSMUST00000121771 632 ntBASIC17.77■□□□□ 0.44
Col6a6Q8C6K9 Gm8520-201ENSMUST00000186517 868 ntBASIC17.77■□□□□ 0.44
Col6a6Q8C6K9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col6a6Q8C6K9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Col6a6Q8C6K9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col6a6Q8C6K9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col6a6Q8C6K9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Col6a6Q8C6K9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col6a6Q8C6K9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.77■□□□□ 0.43
Col6a6Q8C6K9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col6a6Q8C6K9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.76■□□□□ 0.43
Col6a6Q8C6K9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col6a6Q8C6K9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col6a6Q8C6K9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col6a6Q8C6K9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col6a6Q8C6K9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col6a6Q8C6K9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col6a6Q8C6K9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.75■□□□□ 0.43
Col6a6Q8C6K9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col6a6Q8C6K9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col6a6Q8C6K9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col6a6Q8C6K9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Col6a6Q8C6K9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Col6a6Q8C6K9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col6a6Q8C6K9 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.75■□□□□ 0.43
Col6a6Q8C6K9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col6a6Q8C6K9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.75■□□□□ 0.43
Col6a6Q8C6K9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.74■□□□□ 0.43
Col6a6Q8C6K9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Col6a6Q8C6K9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Col6a6Q8C6K9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Col6a6Q8C6K9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a6Q8C6K9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a6Q8C6K9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Col6a6Q8C6K9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Col6a6Q8C6K9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.74■□□□□ 0.43
Col6a6Q8C6K9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a6Q8C6K9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col6a6Q8C6K9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Col6a6Q8C6K9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.73■□□□□ 0.43
Col6a6Q8C6K9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col6a6Q8C6K9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col6a6Q8C6K9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.73■□□□□ 0.43
Col6a6Q8C6K9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.73■□□□□ 0.43
Col6a6Q8C6K9 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.73■□□□□ 0.43
Col6a6Q8C6K9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col6a6Q8C6K9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col6a6Q8C6K9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Col6a6Q8C6K9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Col6a6Q8C6K9 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.72■□□□□ 0.43
Col6a6Q8C6K9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.72■□□□□ 0.43
Col6a6Q8C6K9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col6a6Q8C6K9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.72■□□□□ 0.43
Col6a6Q8C6K9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Col6a6Q8C6K9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col6a6Q8C6K9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.71■□□□□ 0.43
Col6a6Q8C6K9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col6a6Q8C6K9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col6a6Q8C6K9 Mir6236-201ENSMUST00000184437 123 ntBASIC17.71■□□□□ 0.43
Col6a6Q8C6K9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col6a6Q8C6K9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.71■□□□□ 0.43
Col6a6Q8C6K9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col6a6Q8C6K9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Col6a6Q8C6K9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Col6a6Q8C6K9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms