Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ube2d3P61079 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14□□□□□ -0.17
Ube2d3P61079 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ube2d3P61079 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube2d3P61079 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ube2d3P61079 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ube2d3P61079 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.99□□□□□ -0.17
Ube2d3P61079 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.99□□□□□ -0.17
Ube2d3P61079 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Ube2d3P61079 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.99□□□□□ -0.17
Ube2d3P61079 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.99□□□□□ -0.17
Ube2d3P61079 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ube2d3P61079 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Ube2d3P61079 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ube2d3P61079 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube2d3P61079 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube2d3P61079 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube2d3P61079 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube2d3P61079 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ube2d3P61079 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube2d3P61079 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube2d3P61079 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube2d3P61079 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube2d3P61079 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC13.98□□□□□ -0.17
Ube2d3P61079 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13.98□□□□□ -0.17
Ube2d3P61079 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube2d3P61079 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube2d3P61079 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube2d3P61079 Gm9870-201ENSMUST00000063874 645 ntBASIC13.98□□□□□ -0.17
Ube2d3P61079 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube2d3P61079 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube2d3P61079 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube2d3P61079 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube2d3P61079 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Ube2d3P61079 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube2d3P61079 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube2d3P61079 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube2d3P61079 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube2d3P61079 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC13.97□□□□□ -0.17
Ube2d3P61079 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube2d3P61079 Mir6236-201ENSMUST00000184437 123 ntBASIC13.97□□□□□ -0.17
Ube2d3P61079 Gm43530-201ENSMUST00000195920 274 ntBASIC13.97□□□□□ -0.17
Ube2d3P61079 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube2d3P61079 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube2d3P61079 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube2d3P61079 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube2d3P61079 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube2d3P61079 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube2d3P61079 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube2d3P61079 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube2d3P61079 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube2d3P61079 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube2d3P61079 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube2d3P61079 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube2d3P61079 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube2d3P61079 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube2d3P61079 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.96□□□□□ -0.17
Ube2d3P61079 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube2d3P61079 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube2d3P61079 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube2d3P61079 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube2d3P61079 Gm7417-201ENSMUST00000192950 473 ntBASIC13.96□□□□□ -0.17
Ube2d3P61079 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube2d3P61079 Gm5812-201ENSMUST00000061073 957 ntBASIC13.96□□□□□ -0.17
Ube2d3P61079 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ube2d3P61079 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Ube2d3P61079 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ube2d3P61079 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.96□□□□□ -0.18
Ube2d3P61079 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Ube2d3P61079 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Ube2d3P61079 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Ube2d3P61079 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ube2d3P61079 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube2d3P61079 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ube2d3P61079 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube2d3P61079 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube2d3P61079 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube2d3P61079 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube2d3P61079 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube2d3P61079 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
Ube2d3P61079 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube2d3P61079 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ube2d3P61079 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube2d3P61079 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ube2d3P61079 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube2d3P61079 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC13.94□□□□□ -0.18
Ube2d3P61079 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.94□□□□□ -0.18
Ube2d3P61079 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.94□□□□□ -0.18
Ube2d3P61079 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ube2d3P61079 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube2d3P61079 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube2d3P61079 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ube2d3P61079 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube2d3P61079 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube2d3P61079 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube2d3P61079 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Ube2d3P61079 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ube2d3P61079 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ube2d3P61079 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ube2d3P61079 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms