Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SRP54P61011 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRP54P61011 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.76■■□□□ 1.07
SRP54P61011 AC092666.2-201ENST00000613287 246 ntBASIC21.76■■□□□ 1.07
SRP54P61011 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SRP54P61011 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
SRP54P61011 AC004687.1-201ENST00000579003 1625 ntBASIC21.76■■□□□ 1.07
SRP54P61011 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.76■■□□□ 1.07
SRP54P61011 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.75■■□□□ 1.07
SRP54P61011 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRP54P61011 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRP54P61011 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.75■■□□□ 1.07
SRP54P61011 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
SRP54P61011 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRP54P61011 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SRP54P61011 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SRP54P61011 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SRP54P61011 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRP54P61011 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRP54P61011 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRP54P61011 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.74■■□□□ 1.07
SRP54P61011 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRP54P61011 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.74■■□□□ 1.07
SRP54P61011 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SRP54P61011 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRP54P61011 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRP54P61011 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SRP54P61011 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.74■■□□□ 1.07
SRP54P61011 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SRP54P61011 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRP54P61011 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRP54P61011 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRP54P61011 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRP54P61011 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRP54P61011 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.73■■□□□ 1.07
SRP54P61011 AC104564.3-201ENST00000582367 638 ntBASIC21.73■■□□□ 1.07
SRP54P61011 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.73■■□□□ 1.07
SRP54P61011 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SRP54P61011 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.73■■□□□ 1.07
SRP54P61011 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SRP54P61011 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SRP54P61011 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRP54P61011 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRP54P61011 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SRP54P61011 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.72■■□□□ 1.07
SRP54P61011 YBX1P1-201ENST00000445822 960 ntBASIC21.72■■□□□ 1.07
SRP54P61011 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SRP54P61011 AC012414.1-201ENST00000556676 535 ntBASIC21.72■■□□□ 1.07
SRP54P61011 AL354811.1-201ENST00000610286 706 ntBASIC21.72■■□□□ 1.07
SRP54P61011 MIR6084-201ENST00000622012 110 ntBASIC21.72■■□□□ 1.07
SRP54P61011 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.72■■□□□ 1.07
SRP54P61011 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRP54P61011 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SRP54P61011 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SRP54P61011 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRP54P61011 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SRP54P61011 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SRP54P61011 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRP54P61011 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
SRP54P61011 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SRP54P61011 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.71■■□□□ 1.07
SRP54P61011 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SRP54P61011 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.71■■□□□ 1.07
SRP54P61011 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SRP54P61011 AL162430.1-201ENST00000480705 870 ntBASIC21.71■■□□□ 1.07
SRP54P61011 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRP54P61011 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.71■■□□□ 1.07
SRP54P61011 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SRP54P61011 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.71■■□□□ 1.07
SRP54P61011 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SRP54P61011 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.7■■□□□ 1.06
SRP54P61011 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRP54P61011 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRP54P61011 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
SRP54P61011 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.7■■□□□ 1.06
SRP54P61011 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SRP54P61011 AC027612.3-201ENST00000413684 1047 ntBASIC21.7■■□□□ 1.06
SRP54P61011 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.7■■□□□ 1.06
SRP54P61011 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.7■■□□□ 1.06
SRP54P61011 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SRP54P61011 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SRP54P61011 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRP54P61011 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRP54P61011 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SRP54P61011 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRP54P61011 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SRP54P61011 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRP54P61011 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.69■■□□□ 1.06
SRP54P61011 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.69■■□□□ 1.06
SRP54P61011 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SRP54P61011 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRP54P61011 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.69■■□□□ 1.06
SRP54P61011 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SRP54P61011 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SRP54P61011 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.68■■□□□ 1.06
SRP54P61011 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.68■■□□□ 1.06
SRP54P61011 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SRP54P61011 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.68■■□□□ 1.06
SRP54P61011 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.68■■□□□ 1.06
SRP54P61011 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms