Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.13■□□□□ 0.81
CDC42P60953 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CDC42P60953 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CDC42P60953 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CDC42P60953 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42P60953 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDC42P60953 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CDC42P60953 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
CDC42P60953 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.13■□□□□ 0.81
CDC42P60953 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.13■□□□□ 0.81
CDC42P60953 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.12■□□□□ 0.81
CDC42P60953 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.12■□□□□ 0.81
CDC42P60953 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CDC42P60953 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CDC42P60953 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
CDC42P60953 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDC42P60953 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDC42P60953 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.12■□□□□ 0.81
CDC42P60953 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDC42P60953 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.12■□□□□ 0.81
CDC42P60953 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDC42P60953 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.12■□□□□ 0.81
CDC42P60953 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.12■□□□□ 0.81
CDC42P60953 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDC42P60953 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDC42P60953 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDC42P60953 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.11■□□□□ 0.81
CDC42P60953 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.11■□□□□ 0.81
CDC42P60953 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.11■□□□□ 0.81
CDC42P60953 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42P60953 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.11■□□□□ 0.81
CDC42P60953 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42P60953 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CDC42P60953 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.11■□□□□ 0.81
CDC42P60953 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42P60953 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42P60953 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42P60953 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42P60953 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC42P60953 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.1■□□□□ 0.81
CDC42P60953 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CDC42P60953 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.1■□□□□ 0.81
CDC42P60953 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42P60953 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42P60953 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CDC42P60953 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC42P60953 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CDC42P60953 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
CDC42P60953 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42P60953 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42P60953 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42P60953 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.09■□□□□ 0.81
CDC42P60953 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42P60953 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.09■□□□□ 0.81
CDC42P60953 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.09■□□□□ 0.81
CDC42P60953 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.09■□□□□ 0.81
CDC42P60953 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42P60953 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC42P60953 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC42P60953 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC42P60953 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC42P60953 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC42P60953 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC42P60953 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC42P60953 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC42P60953 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC42P60953 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.08■□□□□ 0.81
CDC42P60953 AC004448.1-201ENST00000458332 883 ntBASIC20.08■□□□□ 0.81
CDC42P60953 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.08■□□□□ 0.81
CDC42P60953 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.08■□□□□ 0.81
CDC42P60953 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.08■□□□□ 0.81
CDC42P60953 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDC42P60953 AC026310.3-201ENST00000625186 2373 ntBASIC20.08■□□□□ 0.8
CDC42P60953 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDC42P60953 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
CDC42P60953 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDC42P60953 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
CDC42P60953 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDC42P60953 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.07■□□□□ 0.8
CDC42P60953 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.07■□□□□ 0.8
CDC42P60953 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDC42P60953 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDC42P60953 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDC42P60953 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDC42P60953 AC144652.1-201ENST00000609974 1624 ntBASIC20.07■□□□□ 0.8
CDC42P60953 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.07■□□□□ 0.8
CDC42P60953 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CDC42P60953 AC019171.1-201ENST00000601251 1056 ntBASIC20.07■□□□□ 0.8
CDC42P60953 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.07■□□□□ 0.8
CDC42P60953 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.07■□□□□ 0.8
CDC42P60953 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDC42P60953 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.07■□□□□ 0.8
CDC42P60953 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CDC42P60953 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.06■□□□□ 0.8
CDC42P60953 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDC42P60953 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.06■□□□□ 0.8
CDC42P60953 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.06■□□□□ 0.8
CDC42P60953 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.06■□□□□ 0.8
CDC42P60953 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDC42P60953 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms