Protein–RNA interactions for Protein: O43759

SYNGR1, Synaptogyrin-1, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1O43759 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.74■□□□□ 0.59
SYNGR1O43759 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGR1O43759 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGR1O43759 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGR1O43759 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGR1O43759 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGR1O43759 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SYNGR1O43759 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGR1O43759 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGR1O43759 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGR1O43759 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SYNGR1O43759 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGR1O43759 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SYNGR1O43759 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.73■□□□□ 0.59
SYNGR1O43759 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.73■□□□□ 0.59
SYNGR1O43759 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
SYNGR1O43759 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.73■□□□□ 0.59
SYNGR1O43759 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNGR1O43759 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SYNGR1O43759 AC087742.1-201ENST00000575880 1738 ntBASIC18.72■□□□□ 0.59
SYNGR1O43759 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGR1O43759 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGR1O43759 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGR1O43759 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGR1O43759 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNGR1O43759 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGR1O43759 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNGR1O43759 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SYNGR1O43759 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.72■□□□□ 0.59
SYNGR1O43759 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGR1O43759 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGR1O43759 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGR1O43759 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNGR1O43759 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNGR1O43759 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGR1O43759 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.71■□□□□ 0.59
SYNGR1O43759 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SYNGR1O43759 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SYNGR1O43759 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
SYNGR1O43759 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGR1O43759 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGR1O43759 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGR1O43759 AC127496.7-201ENST00000625110 1798 ntBASIC18.71■□□□□ 0.59
SYNGR1O43759 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGR1O43759 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.71■□□□□ 0.59
SYNGR1O43759 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGR1O43759 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGR1O43759 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.71■□□□□ 0.59
SYNGR1O43759 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.71■□□□□ 0.59
SYNGR1O43759 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGR1O43759 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGR1O43759 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.71■□□□□ 0.58
SYNGR1O43759 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNGR1O43759 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGR1O43759 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.7■□□□□ 0.58
SYNGR1O43759 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNGR1O43759 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGR1O43759 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SYNGR1O43759 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGR1O43759 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNGR1O43759 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGR1O43759 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.7■□□□□ 0.58
SYNGR1O43759 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.7■□□□□ 0.58
SYNGR1O43759 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGR1O43759 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.7■□□□□ 0.58
SYNGR1O43759 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGR1O43759 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNGR1O43759 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.7■□□□□ 0.58
SYNGR1O43759 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGR1O43759 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGR1O43759 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGR1O43759 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNGR1O43759 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGR1O43759 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SYNGR1O43759 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SYNGR1O43759 ECEL1P1-201ENST00000373592 1742 ntBASIC18.69■□□□□ 0.58
SYNGR1O43759 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNGR1O43759 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNGR1O43759 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNGR1O43759 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNGR1O43759 AC006455.2-201ENST00000429931 906 ntBASIC18.69■□□□□ 0.58
SYNGR1O43759 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNGR1O43759 AC241377.3-202ENST00000626088 1088 ntBASIC18.69■□□□□ 0.58
SYNGR1O43759 AC241585.3-202ENST00000628937 1088 ntBASIC18.69■□□□□ 0.58
SYNGR1O43759 AC245100.8-202ENST00000629247 1058 ntBASIC18.69■□□□□ 0.58
SYNGR1O43759 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
SYNGR1O43759 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNGR1O43759 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.69■□□□□ 0.58
SYNGR1O43759 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNGR1O43759 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.68■□□□□ 0.58
SYNGR1O43759 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SYNGR1O43759 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.68■□□□□ 0.58
SYNGR1O43759 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.68■□□□□ 0.58
SYNGR1O43759 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.68■□□□□ 0.58
SYNGR1O43759 AL512631.2-201ENST00000604634 923 ntBASIC18.68■□□□□ 0.58
SYNGR1O43759 AC099791.2-201ENST00000605725 427 ntBASIC18.68■□□□□ 0.58
SYNGR1O43759 AL499627.2-201ENST00000606283 725 ntBASIC18.68■□□□□ 0.58
SYNGR1O43759 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SYNGR1O43759 LINC01960-201ENST00000563759 1884 ntBASIC18.68■□□□□ 0.58
SYNGR1O43759 LINC00526-201ENST00000581067 1875 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms