Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KRT8P42-201ENST00000405771 1399 ntBASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NPIPA3F8WFD2 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 ERG-211ENST00000453032 1595 ntTSL 2 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 AC083801.1-201ENST00000491689 358 ntBASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 FAM86KP-201ENST00000509817 987 ntBASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 AL118516.1-201ENST00000564152 670 ntBASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NPIPA3F8WFD2 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 RNA5SP491-201ENST00000362936 118 ntBASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 AL929302.1-201ENST00000426556 871 ntBASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 AC092810.2-201ENST00000431570 362 ntBASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 AC005077.3-201ENST00000449614 213 ntBASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 AL451000.1-201ENST00000451300 1186 ntBASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 GDNF-207ENST00000515058 764 ntTSL 5 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC12.25□□□□□ -0.45
NPIPA3F8WFD2 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms