Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Crlf3Q9Z2L7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Crlf3Q9Z2L7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.86■□□□□ 0.77
Crlf3Q9Z2L7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Crlf3Q9Z2L7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Crlf3Q9Z2L7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Crlf3Q9Z2L7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Crlf3Q9Z2L7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Crlf3Q9Z2L7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Crlf3Q9Z2L7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Crlf3Q9Z2L7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Crlf3Q9Z2L7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Crlf3Q9Z2L7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Crlf3Q9Z2L7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Crlf3Q9Z2L7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Crlf3Q9Z2L7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Crlf3Q9Z2L7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Crlf3Q9Z2L7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Crlf3Q9Z2L7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Crlf3Q9Z2L7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.84■□□□□ 0.77
Crlf3Q9Z2L7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Crlf3Q9Z2L7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Crlf3Q9Z2L7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Crlf3Q9Z2L7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Crlf3Q9Z2L7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Crlf3Q9Z2L7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Crlf3Q9Z2L7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Crlf3Q9Z2L7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Crlf3Q9Z2L7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Crlf3Q9Z2L7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Crlf3Q9Z2L7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Crlf3Q9Z2L7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Crlf3Q9Z2L7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Crlf3Q9Z2L7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Crlf3Q9Z2L7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Crlf3Q9Z2L7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Crlf3Q9Z2L7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Crlf3Q9Z2L7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Crlf3Q9Z2L7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Crlf3Q9Z2L7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Crlf3Q9Z2L7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Crlf3Q9Z2L7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Crlf3Q9Z2L7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Crlf3Q9Z2L7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Crlf3Q9Z2L7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Crlf3Q9Z2L7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Crlf3Q9Z2L7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Crlf3Q9Z2L7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Crlf3Q9Z2L7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Crlf3Q9Z2L7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Crlf3Q9Z2L7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Crlf3Q9Z2L7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Crlf3Q9Z2L7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Crlf3Q9Z2L7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Crlf3Q9Z2L7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Crlf3Q9Z2L7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Crlf3Q9Z2L7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Crlf3Q9Z2L7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Crlf3Q9Z2L7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Crlf3Q9Z2L7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Crlf3Q9Z2L7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Crlf3Q9Z2L7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Crlf3Q9Z2L7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.8■□□□□ 0.76
Crlf3Q9Z2L7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Crlf3Q9Z2L7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Crlf3Q9Z2L7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Crlf3Q9Z2L7 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.79■□□□□ 0.76
Crlf3Q9Z2L7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crlf3Q9Z2L7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Crlf3Q9Z2L7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crlf3Q9Z2L7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crlf3Q9Z2L7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crlf3Q9Z2L7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crlf3Q9Z2L7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crlf3Q9Z2L7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crlf3Q9Z2L7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crlf3Q9Z2L7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Crlf3Q9Z2L7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.78■□□□□ 0.76
Crlf3Q9Z2L7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Crlf3Q9Z2L7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Crlf3Q9Z2L7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Crlf3Q9Z2L7 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.78■□□□□ 0.76
Crlf3Q9Z2L7 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.78■□□□□ 0.76
Crlf3Q9Z2L7 Rps24-207ENSMUST00000224568 714 ntBASIC19.78■□□□□ 0.76
Crlf3Q9Z2L7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Crlf3Q9Z2L7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Crlf3Q9Z2L7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Crlf3Q9Z2L7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Crlf3Q9Z2L7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Crlf3Q9Z2L7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Crlf3Q9Z2L7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Crlf3Q9Z2L7 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.77■□□□□ 0.76
Crlf3Q9Z2L7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.77■□□□□ 0.76
Crlf3Q9Z2L7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Crlf3Q9Z2L7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Crlf3Q9Z2L7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Crlf3Q9Z2L7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Crlf3Q9Z2L7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Crlf3Q9Z2L7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Crlf3Q9Z2L7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms