Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upk1bQ9Z2C6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upk1bQ9Z2C6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Upk1bQ9Z2C6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Upk1bQ9Z2C6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.26■□□□□ 0.51
Upk1bQ9Z2C6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upk1bQ9Z2C6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Upk1bQ9Z2C6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Upk1bQ9Z2C6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upk1bQ9Z2C6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Upk1bQ9Z2C6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Upk1bQ9Z2C6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Upk1bQ9Z2C6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upk1bQ9Z2C6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Upk1bQ9Z2C6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Upk1bQ9Z2C6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Upk1bQ9Z2C6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.26■□□□□ 0.51
Upk1bQ9Z2C6 Gm10399-202ENSMUST00000202768 748 ntBASIC18.26■□□□□ 0.51
Upk1bQ9Z2C6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.26■□□□□ 0.51
Upk1bQ9Z2C6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Upk1bQ9Z2C6 Gm45444-201ENSMUST00000211394 898 ntBASIC18.25■□□□□ 0.51
Upk1bQ9Z2C6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.25■□□□□ 0.51
Upk1bQ9Z2C6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upk1bQ9Z2C6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upk1bQ9Z2C6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upk1bQ9Z2C6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upk1bQ9Z2C6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk1bQ9Z2C6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk1bQ9Z2C6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk1bQ9Z2C6 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.24■□□□□ 0.51
Upk1bQ9Z2C6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Upk1bQ9Z2C6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Upk1bQ9Z2C6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk1bQ9Z2C6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk1bQ9Z2C6 Gm7143-201ENSMUST00000222811 859 ntBASIC18.24■□□□□ 0.51
Upk1bQ9Z2C6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.24■□□□□ 0.51
Upk1bQ9Z2C6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk1bQ9Z2C6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk1bQ9Z2C6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Upk1bQ9Z2C6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk1bQ9Z2C6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk1bQ9Z2C6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Upk1bQ9Z2C6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk1bQ9Z2C6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Upk1bQ9Z2C6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Upk1bQ9Z2C6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk1bQ9Z2C6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
Upk1bQ9Z2C6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk1bQ9Z2C6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.23■□□□□ 0.51
Upk1bQ9Z2C6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk1bQ9Z2C6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk1bQ9Z2C6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk1bQ9Z2C6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Upk1bQ9Z2C6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1bQ9Z2C6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1bQ9Z2C6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1bQ9Z2C6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1bQ9Z2C6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.22■□□□□ 0.51
Upk1bQ9Z2C6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1bQ9Z2C6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1bQ9Z2C6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Upk1bQ9Z2C6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Upk1bQ9Z2C6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1bQ9Z2C6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1bQ9Z2C6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1bQ9Z2C6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Upk1bQ9Z2C6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1bQ9Z2C6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Upk1bQ9Z2C6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk1bQ9Z2C6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.21■□□□□ 0.51
Upk1bQ9Z2C6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk1bQ9Z2C6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk1bQ9Z2C6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Upk1bQ9Z2C6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk1bQ9Z2C6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk1bQ9Z2C6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk1bQ9Z2C6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Upk1bQ9Z2C6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk1bQ9Z2C6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk1bQ9Z2C6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk1bQ9Z2C6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk1bQ9Z2C6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk1bQ9Z2C6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk1bQ9Z2C6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk1bQ9Z2C6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Upk1bQ9Z2C6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk1bQ9Z2C6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk1bQ9Z2C6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Upk1bQ9Z2C6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.2■□□□□ 0.5
Upk1bQ9Z2C6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Upk1bQ9Z2C6 Mir6538-201ENSMUST00000183713 110 ntBASIC18.19■□□□□ 0.5
Upk1bQ9Z2C6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.19■□□□□ 0.5
Upk1bQ9Z2C6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
Upk1bQ9Z2C6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upk1bQ9Z2C6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk1bQ9Z2C6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Upk1bQ9Z2C6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Upk1bQ9Z2C6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk1bQ9Z2C6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Upk1bQ9Z2C6 Mir6236-201ENSMUST00000184437 123 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms