Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.25■■□□□ 1.31
HCFC1R1Q9NWW0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.25■■□□□ 1.31
HCFC1R1Q9NWW0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HCFC1R1Q9NWW0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
HCFC1R1Q9NWW0 AC105233.4-201ENST00000642045 216 ntBASIC23.25■■□□□ 1.31
HCFC1R1Q9NWW0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
HCFC1R1Q9NWW0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.24■■□□□ 1.31
HCFC1R1Q9NWW0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
HCFC1R1Q9NWW0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
HCFC1R1Q9NWW0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HCFC1R1Q9NWW0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.24■■□□□ 1.31
HCFC1R1Q9NWW0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.24■■□□□ 1.31
HCFC1R1Q9NWW0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HCFC1R1Q9NWW0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HCFC1R1Q9NWW0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.24■■□□□ 1.31
HCFC1R1Q9NWW0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HCFC1R1Q9NWW0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HCFC1R1Q9NWW0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HCFC1R1Q9NWW0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HCFC1R1Q9NWW0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HCFC1R1Q9NWW0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
HCFC1R1Q9NWW0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.23■■□□□ 1.31
HCFC1R1Q9NWW0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.23■■□□□ 1.31
HCFC1R1Q9NWW0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
HCFC1R1Q9NWW0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HCFC1R1Q9NWW0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.23■■□□□ 1.31
HCFC1R1Q9NWW0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
HCFC1R1Q9NWW0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HCFC1R1Q9NWW0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.22■■□□□ 1.31
HCFC1R1Q9NWW0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.22■■□□□ 1.31
HCFC1R1Q9NWW0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
HCFC1R1Q9NWW0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.22■■□□□ 1.31
HCFC1R1Q9NWW0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
HCFC1R1Q9NWW0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.22■■□□□ 1.31
HCFC1R1Q9NWW0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HCFC1R1Q9NWW0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HCFC1R1Q9NWW0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.21■■□□□ 1.31
HCFC1R1Q9NWW0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HCFC1R1Q9NWW0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HCFC1R1Q9NWW0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HCFC1R1Q9NWW0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.21■■□□□ 1.31
HCFC1R1Q9NWW0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.21■■□□□ 1.31
HCFC1R1Q9NWW0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.21■■□□□ 1.31
HCFC1R1Q9NWW0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HCFC1R1Q9NWW0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
HCFC1R1Q9NWW0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HCFC1R1Q9NWW0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.2■■□□□ 1.3
HCFC1R1Q9NWW0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
HCFC1R1Q9NWW0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
HCFC1R1Q9NWW0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.2■■□□□ 1.3
HCFC1R1Q9NWW0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
HCFC1R1Q9NWW0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HCFC1R1Q9NWW0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.2■■□□□ 1.3
HCFC1R1Q9NWW0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HCFC1R1Q9NWW0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.2■■□□□ 1.3
HCFC1R1Q9NWW0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC1R1Q9NWW0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC1R1Q9NWW0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC1R1Q9NWW0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC1R1Q9NWW0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC1R1Q9NWW0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC1R1Q9NWW0 LINC01124-201ENST00000409786 2117 ntBASIC23.19■■□□□ 1.3
HCFC1R1Q9NWW0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC1R1Q9NWW0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC1R1Q9NWW0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.19■■□□□ 1.3
HCFC1R1Q9NWW0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.19■■□□□ 1.3
HCFC1R1Q9NWW0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC1R1Q9NWW0 AC079630.1-202ENST00000618127 1840 ntBASIC23.19■■□□□ 1.3
HCFC1R1Q9NWW0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HCFC1R1Q9NWW0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.18■■□□□ 1.3
HCFC1R1Q9NWW0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
HCFC1R1Q9NWW0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.18■■□□□ 1.3
HCFC1R1Q9NWW0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.18■■□□□ 1.3
HCFC1R1Q9NWW0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HCFC1R1Q9NWW0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HCFC1R1Q9NWW0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HCFC1R1Q9NWW0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.18■■□□□ 1.3
HCFC1R1Q9NWW0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.18■■□□□ 1.3
HCFC1R1Q9NWW0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HCFC1R1Q9NWW0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HCFC1R1Q9NWW0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HCFC1R1Q9NWW0 AC004812.2-201ENST00000611079 2094 ntBASIC23.17■■□□□ 1.3
HCFC1R1Q9NWW0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HCFC1R1Q9NWW0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.17■■□□□ 1.3
HCFC1R1Q9NWW0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HCFC1R1Q9NWW0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.17■■□□□ 1.3
HCFC1R1Q9NWW0 KRT18P61-201ENST00000585825 1298 ntBASIC23.17■■□□□ 1.3
HCFC1R1Q9NWW0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HCFC1R1Q9NWW0 AC004687.1-201ENST00000579003 1625 ntBASIC23.17■■□□□ 1.3
HCFC1R1Q9NWW0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
HCFC1R1Q9NWW0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.17■■□□□ 1.3
HCFC1R1Q9NWW0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HCFC1R1Q9NWW0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HCFC1R1Q9NWW0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.16■■□□□ 1.3
HCFC1R1Q9NWW0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.16■■□□□ 1.3
HCFC1R1Q9NWW0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HCFC1R1Q9NWW0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.16■■□□□ 1.3
HCFC1R1Q9NWW0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.16■■□□□ 1.3
HCFC1R1Q9NWW0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
HCFC1R1Q9NWW0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms