Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.6■□□□□ 0.41
TpbpbQ9CQC0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TpbpbQ9CQC0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TpbpbQ9CQC0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TpbpbQ9CQC0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.6■□□□□ 0.41
TpbpbQ9CQC0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TpbpbQ9CQC0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TpbpbQ9CQC0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TpbpbQ9CQC0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TpbpbQ9CQC0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TpbpbQ9CQC0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TpbpbQ9CQC0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TpbpbQ9CQC0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TpbpbQ9CQC0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TpbpbQ9CQC0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TpbpbQ9CQC0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TpbpbQ9CQC0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.59■□□□□ 0.41
TpbpbQ9CQC0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TpbpbQ9CQC0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TpbpbQ9CQC0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TpbpbQ9CQC0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TpbpbQ9CQC0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TpbpbQ9CQC0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TpbpbQ9CQC0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TpbpbQ9CQC0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TpbpbQ9CQC0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TpbpbQ9CQC0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TpbpbQ9CQC0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TpbpbQ9CQC0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TpbpbQ9CQC0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.58■□□□□ 0.4
TpbpbQ9CQC0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TpbpbQ9CQC0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TpbpbQ9CQC0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TpbpbQ9CQC0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.58■□□□□ 0.4
TpbpbQ9CQC0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TpbpbQ9CQC0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.57■□□□□ 0.4
TpbpbQ9CQC0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TpbpbQ9CQC0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TpbpbQ9CQC0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TpbpbQ9CQC0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TpbpbQ9CQC0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TpbpbQ9CQC0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TpbpbQ9CQC0 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.56■□□□□ 0.4
TpbpbQ9CQC0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TpbpbQ9CQC0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TpbpbQ9CQC0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TpbpbQ9CQC0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.56■□□□□ 0.4
TpbpbQ9CQC0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TpbpbQ9CQC0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TpbpbQ9CQC0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TpbpbQ9CQC0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TpbpbQ9CQC0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TpbpbQ9CQC0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TpbpbQ9CQC0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TpbpbQ9CQC0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TpbpbQ9CQC0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.55■□□□□ 0.4
TpbpbQ9CQC0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.55■□□□□ 0.4
TpbpbQ9CQC0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TpbpbQ9CQC0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TpbpbQ9CQC0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.54■□□□□ 0.4
TpbpbQ9CQC0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TpbpbQ9CQC0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TpbpbQ9CQC0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TpbpbQ9CQC0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TpbpbQ9CQC0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TpbpbQ9CQC0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.54■□□□□ 0.4
TpbpbQ9CQC0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TpbpbQ9CQC0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TpbpbQ9CQC0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TpbpbQ9CQC0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TpbpbQ9CQC0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TpbpbQ9CQC0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TpbpbQ9CQC0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TpbpbQ9CQC0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TpbpbQ9CQC0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TpbpbQ9CQC0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.53■□□□□ 0.4
TpbpbQ9CQC0 Gm12366-201ENSMUST00000121722 873 ntBASIC17.53■□□□□ 0.4
TpbpbQ9CQC0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.53■□□□□ 0.4
TpbpbQ9CQC0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TpbpbQ9CQC0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.53■□□□□ 0.4
TpbpbQ9CQC0 Gm5786-201ENSMUST00000085368 882 ntBASIC17.53■□□□□ 0.4
TpbpbQ9CQC0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TpbpbQ9CQC0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TpbpbQ9CQC0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TpbpbQ9CQC0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TpbpbQ9CQC0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TpbpbQ9CQC0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TpbpbQ9CQC0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TpbpbQ9CQC0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TpbpbQ9CQC0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TpbpbQ9CQC0 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.52■□□□□ 0.4
TpbpbQ9CQC0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TpbpbQ9CQC0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TpbpbQ9CQC0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TpbpbQ9CQC0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TpbpbQ9CQC0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.52■□□□□ 0.4
TpbpbQ9CQC0 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.52■□□□□ 0.4
TpbpbQ9CQC0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TpbpbQ9CQC0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TpbpbQ9CQC0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms