Protein–RNA interactions for Protein: Q91Y15

Pcdha5, Protocadherin alpha 5, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha5Q91Y15 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha5Q91Y15 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdha5Q91Y15 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha5Q91Y15 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha5Q91Y15 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Pcdha5Q91Y15 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Pcdha5Q91Y15 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
Pcdha5Q91Y15 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha5Q91Y15 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.31■□□□□ 0.84
Pcdha5Q91Y15 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha5Q91Y15 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdha5Q91Y15 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha5Q91Y15 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Pcdha5Q91Y15 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha5Q91Y15 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdha5Q91Y15 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha5Q91Y15 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha5Q91Y15 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha5Q91Y15 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha5Q91Y15 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdha5Q91Y15 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha5Q91Y15 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha5Q91Y15 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha5Q91Y15 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha5Q91Y15 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha5Q91Y15 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdha5Q91Y15 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.29■□□□□ 0.84
Pcdha5Q91Y15 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha5Q91Y15 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdha5Q91Y15 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha5Q91Y15 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdha5Q91Y15 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha5Q91Y15 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha5Q91Y15 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha5Q91Y15 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha5Q91Y15 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha5Q91Y15 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha5Q91Y15 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha5Q91Y15 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha5Q91Y15 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha5Q91Y15 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha5Q91Y15 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdha5Q91Y15 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdha5Q91Y15 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha5Q91Y15 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha5Q91Y15 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Pcdha5Q91Y15 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha5Q91Y15 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdha5Q91Y15 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdha5Q91Y15 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha5Q91Y15 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha5Q91Y15 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha5Q91Y15 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha5Q91Y15 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcdha5Q91Y15 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.26■□□□□ 0.83
Pcdha5Q91Y15 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha5Q91Y15 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha5Q91Y15 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha5Q91Y15 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha5Q91Y15 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha5Q91Y15 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdha5Q91Y15 Gm22238-201ENSMUST00000175222 88 ntBASIC20.25■□□□□ 0.83
Pcdha5Q91Y15 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pcdha5Q91Y15 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha5Q91Y15 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdha5Q91Y15 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha5Q91Y15 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha5Q91Y15 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha5Q91Y15 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha5Q91Y15 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.24■□□□□ 0.83
Pcdha5Q91Y15 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha5Q91Y15 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha5Q91Y15 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha5Q91Y15 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdha5Q91Y15 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha5Q91Y15 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha5Q91Y15 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha5Q91Y15 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha5Q91Y15 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha5Q91Y15 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha5Q91Y15 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha5Q91Y15 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha5Q91Y15 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.23■□□□□ 0.83
Pcdha5Q91Y15 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pcdha5Q91Y15 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha5Q91Y15 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha5Q91Y15 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha5Q91Y15 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha5Q91Y15 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha5Q91Y15 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha5Q91Y15 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha5Q91Y15 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha5Q91Y15 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha5Q91Y15 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha5Q91Y15 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pcdha5Q91Y15 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Pcdha5Q91Y15 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha5Q91Y15 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha5Q91Y15 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha5Q91Y15 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms