Protein–RNA interactions for Protein: Q91Y04

Pcdhb15, Protocadherin beta 15, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb15Q91Y04 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Pcdhb15Q91Y04 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb15Q91Y04 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb15Q91Y04 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.21■■□□□ 1.15
Pcdhb15Q91Y04 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.21■■□□□ 1.15
Pcdhb15Q91Y04 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb15Q91Y04 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb15Q91Y04 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC22.21■■□□□ 1.15
Pcdhb15Q91Y04 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb15Q91Y04 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
Pcdhb15Q91Y04 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb15Q91Y04 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb15Q91Y04 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb15Q91Y04 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb15Q91Y04 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb15Q91Y04 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb15Q91Y04 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb15Q91Y04 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb15Q91Y04 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb15Q91Y04 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.19■■□□□ 1.14
Pcdhb15Q91Y04 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Pcdhb15Q91Y04 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb15Q91Y04 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb15Q91Y04 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb15Q91Y04 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb15Q91Y04 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb15Q91Y04 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb15Q91Y04 Golph3-205ENSMUST00000228671 2842 ntBASIC22.18■■□□□ 1.14
Pcdhb15Q91Y04 Gm5112-201ENSMUST00000204407 2368 ntBASIC22.18■■□□□ 1.14
Pcdhb15Q91Y04 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb15Q91Y04 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb15Q91Y04 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.18■■□□□ 1.14
Pcdhb15Q91Y04 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb15Q91Y04 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb15Q91Y04 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb15Q91Y04 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb15Q91Y04 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb15Q91Y04 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb15Q91Y04 Gm15820-201ENSMUST00000201566 728 ntBASIC22.17■■□□□ 1.14
Pcdhb15Q91Y04 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC22.17■■□□□ 1.14
Pcdhb15Q91Y04 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Pcdhb15Q91Y04 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
Pcdhb15Q91Y04 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb15Q91Y04 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb15Q91Y04 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb15Q91Y04 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb15Q91Y04 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb15Q91Y04 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Pcdhb15Q91Y04 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb15Q91Y04 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb15Q91Y04 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb15Q91Y04 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb15Q91Y04 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb15Q91Y04 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.15■■□□□ 1.14
Pcdhb15Q91Y04 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb15Q91Y04 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.15■■□□□ 1.14
Pcdhb15Q91Y04 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb15Q91Y04 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Pcdhb15Q91Y04 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb15Q91Y04 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb15Q91Y04 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdhb15Q91Y04 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhb15Q91Y04 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhb15Q91Y04 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhb15Q91Y04 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Pcdhb15Q91Y04 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhb15Q91Y04 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhb15Q91Y04 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb15Q91Y04 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb15Q91Y04 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Pcdhb15Q91Y04 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb15Q91Y04 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb15Q91Y04 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb15Q91Y04 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb15Q91Y04 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
Pcdhb15Q91Y04 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb15Q91Y04 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb15Q91Y04 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Pcdhb15Q91Y04 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.12■■□□□ 1.13
Pcdhb15Q91Y04 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC22.12■■□□□ 1.13
Pcdhb15Q91Y04 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb15Q91Y04 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC22.12■■□□□ 1.13
Pcdhb15Q91Y04 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb15Q91Y04 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb15Q91Y04 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb15Q91Y04 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb15Q91Y04 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC22.11■■□□□ 1.13
Pcdhb15Q91Y04 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.11■■□□□ 1.13
Pcdhb15Q91Y04 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Pcdhb15Q91Y04 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb15Q91Y04 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb15Q91Y04 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb15Q91Y04 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb15Q91Y04 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb15Q91Y04 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb15Q91Y04 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.1■■□□□ 1.13
Pcdhb15Q91Y04 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb15Q91Y04 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb15Q91Y04 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb15Q91Y04 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms