Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
ARHGEF28Q8N1W1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
ARHGEF28Q8N1W1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
ARHGEF28Q8N1W1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
ARHGEF28Q8N1W1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
ARHGEF28Q8N1W1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC31.14■■■□□ 2.58
ARHGEF28Q8N1W1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ARHGEF28Q8N1W1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC31.14■■■□□ 2.58
ARHGEF28Q8N1W1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ARHGEF28Q8N1W1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
ARHGEF28Q8N1W1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
ARHGEF28Q8N1W1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC31.13■■■□□ 2.57
ARHGEF28Q8N1W1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
ARHGEF28Q8N1W1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC31.13■■■□□ 2.57
ARHGEF28Q8N1W1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
ARHGEF28Q8N1W1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC31.13■■■□□ 2.57
ARHGEF28Q8N1W1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
ARHGEF28Q8N1W1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
ARHGEF28Q8N1W1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC31.12■■■□□ 2.57
ARHGEF28Q8N1W1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC31.12■■■□□ 2.57
ARHGEF28Q8N1W1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ARHGEF28Q8N1W1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ARHGEF28Q8N1W1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ARHGEF28Q8N1W1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
ARHGEF28Q8N1W1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ARHGEF28Q8N1W1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
ARHGEF28Q8N1W1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
ARHGEF28Q8N1W1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC31.12■■■□□ 2.57
ARHGEF28Q8N1W1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ARHGEF28Q8N1W1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
ARHGEF28Q8N1W1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC31.11■■■□□ 2.57
ARHGEF28Q8N1W1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
ARHGEF28Q8N1W1 AC004687.1-201ENST00000579003 1625 ntBASIC31.11■■■□□ 2.57
ARHGEF28Q8N1W1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
ARHGEF28Q8N1W1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
ARHGEF28Q8N1W1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC31.11■■■□□ 2.57
ARHGEF28Q8N1W1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC31.11■■■□□ 2.57
ARHGEF28Q8N1W1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
ARHGEF28Q8N1W1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC31.11■■■□□ 2.57
ARHGEF28Q8N1W1 AC090192.1-201ENST00000517740 490 ntBASIC31.11■■■□□ 2.57
ARHGEF28Q8N1W1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC31.11■■■□□ 2.57
ARHGEF28Q8N1W1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC31.11■■■□□ 2.57
ARHGEF28Q8N1W1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC31.11■■■□□ 2.57
ARHGEF28Q8N1W1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
ARHGEF28Q8N1W1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
ARHGEF28Q8N1W1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC31.11■■■□□ 2.57
ARHGEF28Q8N1W1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
ARHGEF28Q8N1W1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC31.11■■■□□ 2.57
ARHGEF28Q8N1W1 ABCB10P4-201ENST00000566803 2184 ntBASIC31.11■■■□□ 2.57
ARHGEF28Q8N1W1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
ARHGEF28Q8N1W1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
ARHGEF28Q8N1W1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC31.1■■■□□ 2.57
ARHGEF28Q8N1W1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
ARHGEF28Q8N1W1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ARHGEF28Q8N1W1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
ARHGEF28Q8N1W1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
ARHGEF28Q8N1W1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
ARHGEF28Q8N1W1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ARHGEF28Q8N1W1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
ARHGEF28Q8N1W1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ARHGEF28Q8N1W1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ARHGEF28Q8N1W1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
ARHGEF28Q8N1W1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ARHGEF28Q8N1W1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC31.1■■■□□ 2.57
ARHGEF28Q8N1W1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
ARHGEF28Q8N1W1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
ARHGEF28Q8N1W1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
ARHGEF28Q8N1W1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
ARHGEF28Q8N1W1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC31.09■■■□□ 2.57
ARHGEF28Q8N1W1 AC022517.1-201ENST00000592429 346 ntBASIC31.09■■■□□ 2.57
ARHGEF28Q8N1W1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
ARHGEF28Q8N1W1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC31.08■■■□□ 2.57
ARHGEF28Q8N1W1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
ARHGEF28Q8N1W1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
ARHGEF28Q8N1W1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
ARHGEF28Q8N1W1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
ARHGEF28Q8N1W1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
ARHGEF28Q8N1W1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC31.08■■■□□ 2.57
ARHGEF28Q8N1W1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC31.07■■■□□ 2.56
ARHGEF28Q8N1W1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
ARHGEF28Q8N1W1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
ARHGEF28Q8N1W1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
ARHGEF28Q8N1W1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC31.07■■■□□ 2.56
ARHGEF28Q8N1W1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
ARHGEF28Q8N1W1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC31.07■■■□□ 2.56
ARHGEF28Q8N1W1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC31.06■■■□□ 2.56
ARHGEF28Q8N1W1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC31.06■■■□□ 2.56
ARHGEF28Q8N1W1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC31.05■■■□□ 2.56
ARHGEF28Q8N1W1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC31.05■■■□□ 2.56
ARHGEF28Q8N1W1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC31.05■■■□□ 2.56
ARHGEF28Q8N1W1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC31.05■■■□□ 2.56
ARHGEF28Q8N1W1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
ARHGEF28Q8N1W1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ARHGEF28Q8N1W1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
ARHGEF28Q8N1W1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC31.04■■■□□ 2.56
ARHGEF28Q8N1W1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
ARHGEF28Q8N1W1 RARRES2P11-201ENST00000635158 484 ntBASIC31.04■■■□□ 2.56
ARHGEF28Q8N1W1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
ARHGEF28Q8N1W1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC31.04■■■□□ 2.56
ARHGEF28Q8N1W1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms