Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
DDX60Q8IY21 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.7■■■□□ 2.03
DDX60Q8IY21 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.7■■■□□ 2.03
DDX60Q8IY21 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
DDX60Q8IY21 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
DDX60Q8IY21 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.03
DDX60Q8IY21 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.03
DDX60Q8IY21 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC27.7■■■□□ 2.03
DDX60Q8IY21 LHPP-203ENST00000392757 840 ntTSL 3 BASIC27.7■■■□□ 2.03
DDX60Q8IY21 GLI3-203ENST00000437480 451 ntTSL 2 BASIC27.7■■■□□ 2.03
DDX60Q8IY21 KRT18P61-201ENST00000585825 1298 ntBASIC27.7■■■□□ 2.03
DDX60Q8IY21 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC27.7■■■□□ 2.03
DDX60Q8IY21 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.03
DDX60Q8IY21 AC004812.2-201ENST00000611079 2094 ntBASIC27.7■■■□□ 2.02
DDX60Q8IY21 PREB-202ENST00000406567 1910 ntTSL 5 BASIC27.7■■■□□ 2.02
DDX60Q8IY21 LINC01529-204ENST00000636474 1715 ntBASIC27.7■■■□□ 2.02
DDX60Q8IY21 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC27.7■■■□□ 2.02
DDX60Q8IY21 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
DDX60Q8IY21 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC27.7■■■□□ 2.02
DDX60Q8IY21 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
DDX60Q8IY21 H19-210ENST00000439725 1929 ntTSL 2 BASIC27.69■■■□□ 2.02
DDX60Q8IY21 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
DDX60Q8IY21 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
DDX60Q8IY21 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
DDX60Q8IY21 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC27.69■■■□□ 2.02
DDX60Q8IY21 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC27.69■■■□□ 2.02
DDX60Q8IY21 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
DDX60Q8IY21 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
DDX60Q8IY21 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC27.69■■■□□ 2.02
DDX60Q8IY21 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC27.69■■■□□ 2.02
DDX60Q8IY21 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
DDX60Q8IY21 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
DDX60Q8IY21 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
DDX60Q8IY21 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
DDX60Q8IY21 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
DDX60Q8IY21 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC27.68■■■□□ 2.02
DDX60Q8IY21 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC27.68■■■□□ 2.02
DDX60Q8IY21 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
DDX60Q8IY21 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
DDX60Q8IY21 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
DDX60Q8IY21 RARRES2P11-201ENST00000635158 484 ntBASIC27.67■■■□□ 2.02
DDX60Q8IY21 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
DDX60Q8IY21 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC27.67■■■□□ 2.02
DDX60Q8IY21 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
DDX60Q8IY21 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC27.67■■■□□ 2.02
DDX60Q8IY21 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
DDX60Q8IY21 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
DDX60Q8IY21 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC27.67■■■□□ 2.02
DDX60Q8IY21 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC27.67■■■□□ 2.02
DDX60Q8IY21 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC27.67■■■□□ 2.02
DDX60Q8IY21 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
DDX60Q8IY21 STX4-202ENST00000394998 1498 ntTSL 2 BASIC27.66■■■□□ 2.02
DDX60Q8IY21 AL139125.2-201ENST00000623134 1869 ntBASIC27.66■■■□□ 2.02
DDX60Q8IY21 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
DDX60Q8IY21 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
DDX60Q8IY21 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
DDX60Q8IY21 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
DDX60Q8IY21 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC27.66■■■□□ 2.02
DDX60Q8IY21 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
DDX60Q8IY21 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
DDX60Q8IY21 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
DDX60Q8IY21 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
DDX60Q8IY21 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
DDX60Q8IY21 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
DDX60Q8IY21 AC004687.1-201ENST00000579003 1625 ntBASIC27.65■■■□□ 2.02
DDX60Q8IY21 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
DDX60Q8IY21 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
DDX60Q8IY21 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
DDX60Q8IY21 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
DDX60Q8IY21 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
DDX60Q8IY21 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
DDX60Q8IY21 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC27.64■■■□□ 2.01
DDX60Q8IY21 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
DDX60Q8IY21 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
DDX60Q8IY21 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
DDX60Q8IY21 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
DDX60Q8IY21 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC27.63■■■□□ 2.01
DDX60Q8IY21 AL137784.2-201ENST00000607332 1000 ntBASIC27.63■■■□□ 2.01
DDX60Q8IY21 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
DDX60Q8IY21 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
DDX60Q8IY21 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC27.63■■■□□ 2.01
DDX60Q8IY21 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
DDX60Q8IY21 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC27.62■■■□□ 2.01
DDX60Q8IY21 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC27.62■■■□□ 2.01
DDX60Q8IY21 ABCB10P4-201ENST00000566803 2184 ntBASIC27.62■■■□□ 2.01
DDX60Q8IY21 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
DDX60Q8IY21 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
DDX60Q8IY21 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
DDX60Q8IY21 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
DDX60Q8IY21 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC27.61■■■□□ 2.01
DDX60Q8IY21 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
DDX60Q8IY21 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
DDX60Q8IY21 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
DDX60Q8IY21 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC27.61■■■□□ 2.01
DDX60Q8IY21 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC27.61■■■□□ 2.01
DDX60Q8IY21 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC27.61■■■□□ 2.01
DDX60Q8IY21 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC27.61■■■□□ 2.01
DDX60Q8IY21 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC27.61■■■□□ 2.01
DDX60Q8IY21 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
DDX60Q8IY21 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms