Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf38Q8BI21 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf38Q8BI21 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf38Q8BI21 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Rnf38Q8BI21 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.01■□□□□ 0.63
Rnf38Q8BI21 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf38Q8BI21 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf38Q8BI21 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf38Q8BI21 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf38Q8BI21 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf38Q8BI21 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.01■□□□□ 0.63
Rnf38Q8BI21 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf38Q8BI21 Gm20100-201ENSMUST00000209418 2272 ntBASIC19■□□□□ 0.63
Rnf38Q8BI21 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19■□□□□ 0.63
Rnf38Q8BI21 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf38Q8BI21 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf38Q8BI21 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf38Q8BI21 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf38Q8BI21 Golph3-205ENSMUST00000228671 2842 ntBASIC19■□□□□ 0.63
Rnf38Q8BI21 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf38Q8BI21 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf38Q8BI21 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf38Q8BI21 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf38Q8BI21 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf38Q8BI21 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.99■□□□□ 0.63
Rnf38Q8BI21 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf38Q8BI21 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf38Q8BI21 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf38Q8BI21 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf38Q8BI21 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.99■□□□□ 0.63
Rnf38Q8BI21 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf38Q8BI21 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf38Q8BI21 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf38Q8BI21 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.99■□□□□ 0.63
Rnf38Q8BI21 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf38Q8BI21 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf38Q8BI21 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Rnf38Q8BI21 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Rnf38Q8BI21 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf38Q8BI21 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf38Q8BI21 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf38Q8BI21 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.98■□□□□ 0.63
Rnf38Q8BI21 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf38Q8BI21 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Rnf38Q8BI21 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf38Q8BI21 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf38Q8BI21 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf38Q8BI21 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.98■□□□□ 0.63
Rnf38Q8BI21 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
Rnf38Q8BI21 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rnf38Q8BI21 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf38Q8BI21 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.97■□□□□ 0.63
Rnf38Q8BI21 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf38Q8BI21 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf38Q8BI21 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Rnf38Q8BI21 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.97■□□□□ 0.63
Rnf38Q8BI21 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf38Q8BI21 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Rnf38Q8BI21 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Rnf38Q8BI21 Gm9959-201ENSMUST00000068277 390 ntBASIC18.97■□□□□ 0.63
Rnf38Q8BI21 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.97■□□□□ 0.63
Rnf38Q8BI21 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf38Q8BI21 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf38Q8BI21 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf38Q8BI21 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf38Q8BI21 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf38Q8BI21 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
Rnf38Q8BI21 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.62
Rnf38Q8BI21 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf38Q8BI21 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf38Q8BI21 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Rnf38Q8BI21 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf38Q8BI21 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf38Q8BI21 Etf1-202ENSMUST00000180351 108 ntBASIC18.95■□□□□ 0.62
Rnf38Q8BI21 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.95■□□□□ 0.62
Rnf38Q8BI21 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf38Q8BI21 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf38Q8BI21 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf38Q8BI21 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf38Q8BI21 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf38Q8BI21 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms