Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.68■■□□□ 1.38
DDX53Q86TM3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
DDX53Q86TM3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
DDX53Q86TM3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
DDX53Q86TM3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.67■■□□□ 1.38
DDX53Q86TM3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX53Q86TM3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX53Q86TM3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX53Q86TM3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.67■■□□□ 1.38
DDX53Q86TM3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.67■■□□□ 1.38
DDX53Q86TM3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.67■■□□□ 1.38
DDX53Q86TM3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.67■■□□□ 1.38
DDX53Q86TM3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.67■■□□□ 1.38
DDX53Q86TM3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX53Q86TM3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
DDX53Q86TM3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.67■■□□□ 1.38
DDX53Q86TM3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX53Q86TM3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
DDX53Q86TM3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX53Q86TM3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
DDX53Q86TM3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX53Q86TM3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
DDX53Q86TM3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.66■■□□□ 1.38
DDX53Q86TM3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.66■■□□□ 1.38
DDX53Q86TM3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
DDX53Q86TM3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
DDX53Q86TM3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX53Q86TM3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX53Q86TM3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
DDX53Q86TM3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
DDX53Q86TM3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX53Q86TM3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
DDX53Q86TM3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX53Q86TM3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX53Q86TM3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.65■■□□□ 1.38
DDX53Q86TM3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.65■■□□□ 1.38
DDX53Q86TM3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
DDX53Q86TM3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.65■■□□□ 1.38
DDX53Q86TM3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.65■■□□□ 1.38
DDX53Q86TM3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX53Q86TM3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
DDX53Q86TM3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.65■■□□□ 1.38
DDX53Q86TM3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
DDX53Q86TM3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
DDX53Q86TM3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
DDX53Q86TM3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX53Q86TM3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
DDX53Q86TM3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.64■■□□□ 1.37
DDX53Q86TM3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.64■■□□□ 1.37
DDX53Q86TM3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.64■■□□□ 1.37
DDX53Q86TM3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.64■■□□□ 1.37
DDX53Q86TM3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.64■■□□□ 1.37
DDX53Q86TM3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.37
DDX53Q86TM3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX53Q86TM3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.64■■□□□ 1.37
DDX53Q86TM3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
DDX53Q86TM3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX53Q86TM3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX53Q86TM3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX53Q86TM3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
DDX53Q86TM3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.63■■□□□ 1.37
DDX53Q86TM3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.63■■□□□ 1.37
DDX53Q86TM3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX53Q86TM3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
DDX53Q86TM3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
DDX53Q86TM3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.62■■□□□ 1.37
DDX53Q86TM3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX53Q86TM3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DDX53Q86TM3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.62■■□□□ 1.37
DDX53Q86TM3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.62■■□□□ 1.37
DDX53Q86TM3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.62■■□□□ 1.37
DDX53Q86TM3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX53Q86TM3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX53Q86TM3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DDX53Q86TM3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.61■■□□□ 1.37
DDX53Q86TM3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
DDX53Q86TM3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.61■■□□□ 1.37
DDX53Q86TM3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.61■■□□□ 1.37
DDX53Q86TM3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.61■■□□□ 1.37
DDX53Q86TM3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.6■■□□□ 1.37
DDX53Q86TM3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX53Q86TM3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
DDX53Q86TM3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX53Q86TM3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.6■■□□□ 1.37
DDX53Q86TM3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.6■■□□□ 1.37
DDX53Q86TM3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX53Q86TM3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
DDX53Q86TM3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
DDX53Q86TM3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX53Q86TM3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX53Q86TM3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX53Q86TM3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
DDX53Q86TM3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX53Q86TM3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.59■■□□□ 1.37
DDX53Q86TM3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX53Q86TM3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX53Q86TM3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX53Q86TM3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
DDX53Q86TM3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX53Q86TM3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms