Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
Col11a1Q61245 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Col11a1Q61245 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col11a1Q61245 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col11a1Q61245 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col11a1Q61245 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col11a1Q61245 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC22.59■■□□□ 1.21
Col11a1Q61245 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.59■■□□□ 1.21
Col11a1Q61245 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col11a1Q61245 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col11a1Q61245 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col11a1Q61245 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col11a1Q61245 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Col11a1Q61245 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.59■■□□□ 1.21
Col11a1Q61245 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col11a1Q61245 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.59■■□□□ 1.21
Col11a1Q61245 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col11a1Q61245 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col11a1Q61245 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Col11a1Q61245 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col11a1Q61245 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC22.58■■□□□ 1.21
Col11a1Q61245 Gm44878-201ENSMUST00000205812 1295 ntBASIC22.58■■□□□ 1.21
Col11a1Q61245 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col11a1Q61245 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col11a1Q61245 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Col11a1Q61245 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col11a1Q61245 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Col11a1Q61245 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Col11a1Q61245 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col11a1Q61245 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col11a1Q61245 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col11a1Q61245 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col11a1Q61245 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Col11a1Q61245 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col11a1Q61245 AC158538.1-201ENSMUST00000225870 294 ntBASIC22.56■■□□□ 1.2
Col11a1Q61245 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Col11a1Q61245 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col11a1Q61245 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Col11a1Q61245 Gm13181-201ENSMUST00000120117 1069 ntBASIC22.55■■□□□ 1.2
Col11a1Q61245 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Col11a1Q61245 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Col11a1Q61245 AC135963.1-201ENSMUST00000211640 717 ntBASIC22.55■■□□□ 1.2
Col11a1Q61245 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col11a1Q61245 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col11a1Q61245 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
Col11a1Q61245 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
Col11a1Q61245 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.54■■□□□ 1.2
Col11a1Q61245 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col11a1Q61245 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC22.54■■□□□ 1.2
Col11a1Q61245 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col11a1Q61245 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col11a1Q61245 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Col11a1Q61245 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col11a1Q61245 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col11a1Q61245 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col11a1Q61245 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC22.54■■□□□ 1.2
Col11a1Q61245 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col11a1Q61245 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.53■■□□□ 1.2
Col11a1Q61245 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col11a1Q61245 Gm13534-201ENSMUST00000121169 513 ntBASIC22.53■■□□□ 1.2
Col11a1Q61245 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC22.53■■□□□ 1.2
Col11a1Q61245 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Col11a1Q61245 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Col11a1Q61245 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Col11a1Q61245 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Col11a1Q61245 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC22.52■■□□□ 1.2
Col11a1Q61245 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Col11a1Q61245 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.52■■□□□ 1.2
Col11a1Q61245 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col11a1Q61245 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col11a1Q61245 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Col11a1Q61245 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Col11a1Q61245 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Col11a1Q61245 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Col11a1Q61245 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col11a1Q61245 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col11a1Q61245 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.51■■□□□ 1.19
Col11a1Q61245 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col11a1Q61245 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col11a1Q61245 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col11a1Q61245 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col11a1Q61245 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col11a1Q61245 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col11a1Q61245 Mir6982-201ENSMUST00000184354 68 ntBASIC22.5■■□□□ 1.19
Col11a1Q61245 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col11a1Q61245 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col11a1Q61245 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col11a1Q61245 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col11a1Q61245 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col11a1Q61245 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Col11a1Q61245 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC22.48■■□□□ 1.19
Col11a1Q61245 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC22.48■■□□□ 1.19
Col11a1Q61245 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.48■■□□□ 1.19
Col11a1Q61245 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Col11a1Q61245 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col11a1Q61245 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Col11a1Q61245 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.47■■□□□ 1.19
Col11a1Q61245 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col11a1Q61245 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
Col11a1Q61245 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.47■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms