Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.88■□□□□ 0.77
CASP6P55212 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.88■□□□□ 0.77
CASP6P55212 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.88■□□□□ 0.77
CASP6P55212 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASP6P55212 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CASP6P55212 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASP6P55212 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASP6P55212 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CASP6P55212 TERF1P2-201ENST00000583350 1212 ntBASIC19.88■□□□□ 0.77
CASP6P55212 AC010525.1-201ENST00000585559 441 ntBASIC19.88■□□□□ 0.77
CASP6P55212 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.88■□□□□ 0.77
CASP6P55212 AC092437.1-201ENST00000624794 1048 ntBASIC19.88■□□□□ 0.77
CASP6P55212 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
CASP6P55212 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CASP6P55212 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASP6P55212 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASP6P55212 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CASP6P55212 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASP6P55212 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASP6P55212 LINC01529-204ENST00000636474 1715 ntBASIC19.88■□□□□ 0.77
CASP6P55212 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CASP6P55212 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.87■□□□□ 0.77
CASP6P55212 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CASP6P55212 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CASP6P55212 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP6P55212 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP6P55212 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CASP6P55212 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP6P55212 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.87■□□□□ 0.77
CASP6P55212 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP6P55212 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP6P55212 ID1-201ENST00000376105 1233 ntBASIC19.87■□□□□ 0.77
CASP6P55212 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.87■□□□□ 0.77
CASP6P55212 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP6P55212 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP6P55212 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP6P55212 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CASP6P55212 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASP6P55212 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASP6P55212 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.86■□□□□ 0.77
CASP6P55212 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASP6P55212 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.86■□□□□ 0.77
CASP6P55212 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.86■□□□□ 0.77
CASP6P55212 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.86■□□□□ 0.77
CASP6P55212 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CASP6P55212 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.86■□□□□ 0.77
CASP6P55212 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.86■□□□□ 0.77
CASP6P55212 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.86■□□□□ 0.77
CASP6P55212 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.86■□□□□ 0.77
CASP6P55212 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CASP6P55212 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASP6P55212 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CASP6P55212 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CASP6P55212 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASP6P55212 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASP6P55212 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CASP6P55212 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.85■□□□□ 0.77
CASP6P55212 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASP6P55212 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.85■□□□□ 0.77
CASP6P55212 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.85■□□□□ 0.77
CASP6P55212 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASP6P55212 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CASP6P55212 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASP6P55212 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CASP6P55212 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CASP6P55212 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.84■□□□□ 0.77
CASP6P55212 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.84■□□□□ 0.77
CASP6P55212 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CASP6P55212 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASP6P55212 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASP6P55212 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CASP6P55212 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASP6P55212 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CASP6P55212 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CASP6P55212 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.83■□□□□ 0.77
CASP6P55212 AC016769.1-201ENST00000409132 1010 ntBASIC19.83■□□□□ 0.77
CASP6P55212 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASP6P55212 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CASP6P55212 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.83■□□□□ 0.77
CASP6P55212 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASP6P55212 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASP6P55212 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CASP6P55212 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASP6P55212 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CASP6P55212 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CASP6P55212 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.83■□□□□ 0.76
CASP6P55212 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CASP6P55212 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CASP6P55212 AC144652.1-201ENST00000609974 1624 ntBASIC19.83■□□□□ 0.76
CASP6P55212 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.83■□□□□ 0.76
CASP6P55212 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.83■□□□□ 0.76
CASP6P55212 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASP6P55212 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASP6P55212 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASP6P55212 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.82■□□□□ 0.76
CASP6P55212 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.82■□□□□ 0.76
CASP6P55212 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.82■□□□□ 0.76
CASP6P55212 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CASP6P55212 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASP6P55212 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms