Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LIMK1P53667 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LIMK1P53667 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LIMK1P53667 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LIMK1P53667 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LIMK1P53667 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.98■■□□□ 1.11
LIMK1P53667 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.98■■□□□ 1.11
LIMK1P53667 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.98■■□□□ 1.11
LIMK1P53667 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.98■■□□□ 1.11
LIMK1P53667 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
LIMK1P53667 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LIMK1P53667 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
LIMK1P53667 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
LIMK1P53667 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.97■■□□□ 1.11
LIMK1P53667 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LIMK1P53667 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.97■■□□□ 1.11
LIMK1P53667 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.97■■□□□ 1.11
LIMK1P53667 AP005435.1-201ENST00000529293 1178 ntBASIC21.97■■□□□ 1.11
LIMK1P53667 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.97■■□□□ 1.11
LIMK1P53667 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.97■■□□□ 1.11
LIMK1P53667 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
LIMK1P53667 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LIMK1P53667 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
LIMK1P53667 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LIMK1P53667 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LIMK1P53667 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
LIMK1P53667 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
LIMK1P53667 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.96■■□□□ 1.11
LIMK1P53667 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LIMK1P53667 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LIMK1P53667 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LIMK1P53667 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.96■■□□□ 1.11
LIMK1P53667 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LIMK1P53667 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.96■■□□□ 1.11
LIMK1P53667 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
LIMK1P53667 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
LIMK1P53667 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LIMK1P53667 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.95■■□□□ 1.1
LIMK1P53667 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.95■■□□□ 1.1
LIMK1P53667 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LIMK1P53667 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LIMK1P53667 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.95■■□□□ 1.1
LIMK1P53667 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LIMK1P53667 AC142381.3-201ENST00000568208 1670 ntBASIC21.95■■□□□ 1.1
LIMK1P53667 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LIMK1P53667 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.94■■□□□ 1.1
LIMK1P53667 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LIMK1P53667 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LIMK1P53667 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.94■■□□□ 1.1
LIMK1P53667 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.94■■□□□ 1.1
LIMK1P53667 OR2I1P-207ENST00000453522 948 ntBASIC21.94■■□□□ 1.1
LIMK1P53667 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.94■■□□□ 1.1
LIMK1P53667 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LIMK1P53667 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.94■■□□□ 1.1
LIMK1P53667 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.94■■□□□ 1.1
LIMK1P53667 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
LIMK1P53667 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LIMK1P53667 AC133637.1-201ENST00000624115 1537 ntBASIC21.94■■□□□ 1.1
LIMK1P53667 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LIMK1P53667 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.94■■□□□ 1.1
LIMK1P53667 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
LIMK1P53667 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.93■■□□□ 1.1
LIMK1P53667 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
LIMK1P53667 GPX1P1-201ENST00000388829 606 ntBASIC21.93■■□□□ 1.1
LIMK1P53667 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.93■■□□□ 1.1
LIMK1P53667 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
LIMK1P53667 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LIMK1P53667 TSPY20P-201ENST00000450910 630 ntBASIC21.93■■□□□ 1.1
LIMK1P53667 AC105233.4-201ENST00000642045 216 ntBASIC21.93■■□□□ 1.1
LIMK1P53667 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LIMK1P53667 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.92■■□□□ 1.1
LIMK1P53667 AL139125.2-201ENST00000623134 1869 ntBASIC21.92■■□□□ 1.1
LIMK1P53667 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.92■■□□□ 1.1
LIMK1P53667 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
LIMK1P53667 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LIMK1P53667 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LIMK1P53667 AC142086.2-201ENST00000569753 217 ntBASIC21.92■■□□□ 1.1
LIMK1P53667 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.92■■□□□ 1.1
LIMK1P53667 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LIMK1P53667 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
LIMK1P53667 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.91■■□□□ 1.1
LIMK1P53667 AC133561.1-201ENST00000568600 2415 ntBASIC21.91■■□□□ 1.1
LIMK1P53667 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LIMK1P53667 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.91■■□□□ 1.1
LIMK1P53667 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.91■■□□□ 1.1
LIMK1P53667 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.91■■□□□ 1.1
LIMK1P53667 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LIMK1P53667 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
LIMK1P53667 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LIMK1P53667 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.91■■□□□ 1.1
LIMK1P53667 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.91■■□□□ 1.1
LIMK1P53667 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LIMK1P53667 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
LIMK1P53667 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
LIMK1P53667 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LIMK1P53667 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
LIMK1P53667 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LIMK1P53667 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.9■■□□□ 1.1
LIMK1P53667 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LIMK1P53667 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms