Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 MIR4466-201ENST00000606121 54 ntBASIC21.1■□□□□ 0.97
SSR2P43308 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.1■□□□□ 0.97
SSR2P43308 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SSR2P43308 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SSR2P43308 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SSR2P43308 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSR2P43308 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SSR2P43308 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.09■□□□□ 0.97
SSR2P43308 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.09■□□□□ 0.97
SSR2P43308 AC006455.2-201ENST00000429931 906 ntBASIC21.09■□□□□ 0.97
SSR2P43308 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SSR2P43308 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SSR2P43308 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSR2P43308 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSR2P43308 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.09■□□□□ 0.97
SSR2P43308 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSR2P43308 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.09■□□□□ 0.97
SSR2P43308 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.09■□□□□ 0.97
SSR2P43308 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SSR2P43308 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SSR2P43308 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SSR2P43308 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SSR2P43308 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.08■□□□□ 0.97
SSR2P43308 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.08■□□□□ 0.97
SSR2P43308 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SSR2P43308 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.08■□□□□ 0.97
SSR2P43308 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SSR2P43308 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
SSR2P43308 AC012676.1-201ENST00000574705 1949 ntBASIC21.08■□□□□ 0.96
SSR2P43308 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
SSR2P43308 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
SSR2P43308 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.07■□□□□ 0.96
SSR2P43308 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SSR2P43308 C1orf229-201ENST00000623686 2258 ntBASIC21.07■□□□□ 0.96
SSR2P43308 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.07■□□□□ 0.96
SSR2P43308 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SSR2P43308 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SSR2P43308 AC092171.4-201ENST00000609130 632 ntBASIC21.07■□□□□ 0.96
SSR2P43308 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.07■□□□□ 0.96
SSR2P43308 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.07■□□□□ 0.96
SSR2P43308 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.07■□□□□ 0.96
SSR2P43308 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SSR2P43308 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.07■□□□□ 0.96
SSR2P43308 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.07■□□□□ 0.96
SSR2P43308 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
SSR2P43308 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SSR2P43308 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
SSR2P43308 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SSR2P43308 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SSR2P43308 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
SSR2P43308 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SSR2P43308 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.06■□□□□ 0.96
SSR2P43308 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SSR2P43308 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.06■□□□□ 0.96
SSR2P43308 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
SSR2P43308 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.06■□□□□ 0.96
SSR2P43308 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.06■□□□□ 0.96
SSR2P43308 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.06■□□□□ 0.96
SSR2P43308 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SSR2P43308 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SSR2P43308 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SSR2P43308 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SSR2P43308 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SSR2P43308 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSR2P43308 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSR2P43308 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSR2P43308 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSR2P43308 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SSR2P43308 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SSR2P43308 AC004687.1-201ENST00000579003 1625 ntBASIC21.05■□□□□ 0.96
SSR2P43308 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSR2P43308 AL136116.3-201ENST00000402907 1138 ntBASIC21.05■□□□□ 0.96
SSR2P43308 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSR2P43308 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SSR2P43308 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SSR2P43308 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SSR2P43308 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SSR2P43308 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.04■□□□□ 0.96
SSR2P43308 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.04■□□□□ 0.96
SSR2P43308 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.04■□□□□ 0.96
SSR2P43308 AL499627.2-201ENST00000606283 725 ntBASIC21.04■□□□□ 0.96
SSR2P43308 pRNA.6-201ENST00000610482 90 ntBASIC21.04■□□□□ 0.96
SSR2P43308 pRNA.5-201ENST00000612139 90 ntBASIC21.04■□□□□ 0.96
SSR2P43308 pRNA.11-201ENST00000618423 90 ntBASIC21.04■□□□□ 0.96
SSR2P43308 pRNA.13-201ENST00000619112 90 ntBASIC21.04■□□□□ 0.96
SSR2P43308 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SSR2P43308 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SSR2P43308 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.04■□□□□ 0.96
SSR2P43308 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SSR2P43308 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SSR2P43308 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SSR2P43308 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SSR2P43308 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SSR2P43308 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.03■□□□□ 0.96
SSR2P43308 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SSR2P43308 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SSR2P43308 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR2P43308 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR2P43308 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.02■□□□□ 0.96
SSR2P43308 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms