Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cd48P18181 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Cd48P18181 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.65■□□□□ 0.42
Cd48P18181 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.65■□□□□ 0.42
Cd48P18181 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cd48P18181 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.65■□□□□ 0.42
Cd48P18181 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.65■□□□□ 0.42
Cd48P18181 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cd48P18181 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.64■□□□□ 0.42
Cd48P18181 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd48P18181 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd48P18181 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cd48P18181 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cd48P18181 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cd48P18181 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd48P18181 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.64■□□□□ 0.41
Cd48P18181 Gm5812-201ENSMUST00000061073 957 ntBASIC17.64■□□□□ 0.41
Cd48P18181 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cd48P18181 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cd48P18181 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd48P18181 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cd48P18181 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd48P18181 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd48P18181 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd48P18181 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cd48P18181 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cd48P18181 Mir6236-201ENSMUST00000184437 123 ntBASIC17.63■□□□□ 0.41
Cd48P18181 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cd48P18181 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd48P18181 Gm9870-201ENSMUST00000063874 645 ntBASIC17.63■□□□□ 0.41
Cd48P18181 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.63■□□□□ 0.41
Cd48P18181 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd48P18181 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd48P18181 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd48P18181 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Cd48P18181 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd48P18181 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Cd48P18181 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd48P18181 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cd48P18181 Gm15546-201ENSMUST00000122095 826 ntBASIC17.62■□□□□ 0.41
Cd48P18181 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.62■□□□□ 0.41
Cd48P18181 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Cd48P18181 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cd48P18181 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.61■□□□□ 0.41
Cd48P18181 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd48P18181 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.61■□□□□ 0.41
Cd48P18181 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cd48P18181 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cd48P18181 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd48P18181 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd48P18181 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd48P18181 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd48P18181 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.61■□□□□ 0.41
Cd48P18181 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd48P18181 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cd48P18181 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd48P18181 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd48P18181 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd48P18181 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
Cd48P18181 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cd48P18181 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Cd48P18181 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd48P18181 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.59■□□□□ 0.41
Cd48P18181 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd48P18181 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd48P18181 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd48P18181 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.59■□□□□ 0.41
Cd48P18181 Gm43530-201ENSMUST00000195920 274 ntBASIC17.59■□□□□ 0.41
Cd48P18181 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cd48P18181 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cd48P18181 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cd48P18181 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cd48P18181 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
Cd48P18181 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.58■□□□□ 0.4
Cd48P18181 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.58■□□□□ 0.4
Cd48P18181 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd48P18181 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd48P18181 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd48P18181 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd48P18181 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd48P18181 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd48P18181 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd48P18181 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd48P18181 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cd48P18181 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cd48P18181 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd48P18181 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cd48P18181 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.57■□□□□ 0.4
Cd48P18181 Etf1-202ENSMUST00000180351 108 ntBASIC17.57■□□□□ 0.4
Cd48P18181 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd48P18181 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd48P18181 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd48P18181 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cd48P18181 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd48P18181 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cd48P18181 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Cd48P18181 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Cd48P18181 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd48P18181 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd48P18181 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms