Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1bO55017 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1bO55017 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.12■□□□□ 0.65
Cacna1bO55017 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.12■□□□□ 0.65
Cacna1bO55017 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.12■□□□□ 0.65
Cacna1bO55017 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1bO55017 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1bO55017 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1bO55017 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1bO55017 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1bO55017 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cacna1bO55017 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Cacna1bO55017 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1bO55017 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1bO55017 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1bO55017 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.1■□□□□ 0.65
Cacna1bO55017 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1bO55017 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1bO55017 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1bO55017 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1bO55017 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.09■□□□□ 0.65
Cacna1bO55017 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1bO55017 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.09■□□□□ 0.65
Cacna1bO55017 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1bO55017 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1bO55017 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1bO55017 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1bO55017 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1bO55017 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1bO55017 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cacna1bO55017 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1bO55017 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1bO55017 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1bO55017 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1bO55017 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1bO55017 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1bO55017 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1bO55017 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1bO55017 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1bO55017 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1bO55017 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.08■□□□□ 0.64
Cacna1bO55017 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1bO55017 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1bO55017 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.08■□□□□ 0.64
Cacna1bO55017 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1bO55017 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1bO55017 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1bO55017 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1bO55017 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Cacna1bO55017 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1bO55017 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1bO55017 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1bO55017 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1bO55017 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1bO55017 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Cacna1bO55017 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.07■□□□□ 0.64
Cacna1bO55017 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1bO55017 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1bO55017 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1bO55017 Gm22325-201ENSMUST00000158904 308 ntBASIC19.06■□□□□ 0.64
Cacna1bO55017 Gm5408-201ENSMUST00000197998 747 ntBASIC19.06■□□□□ 0.64
Cacna1bO55017 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.06■□□□□ 0.64
Cacna1bO55017 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cacna1bO55017 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1bO55017 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1bO55017 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1bO55017 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cacna1bO55017 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.06■□□□□ 0.64
Cacna1bO55017 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.06■□□□□ 0.64
Cacna1bO55017 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.06■□□□□ 0.64
Cacna1bO55017 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1bO55017 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1bO55017 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cacna1bO55017 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cacna1bO55017 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cacna1bO55017 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cacna1bO55017 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cacna1bO55017 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.05■□□□□ 0.64
Cacna1bO55017 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cacna1bO55017 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cacna1bO55017 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cacna1bO55017 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.05■□□□□ 0.64
Cacna1bO55017 Gm13168-201ENSMUST00000121771 632 ntBASIC19.05■□□□□ 0.64
Cacna1bO55017 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cacna1bO55017 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.04■□□□□ 0.64
Cacna1bO55017 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cacna1bO55017 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cacna1bO55017 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cacna1bO55017 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.04■□□□□ 0.64
Cacna1bO55017 Gm13146-201ENSMUST00000118508 780 ntBASIC19.03■□□□□ 0.64
Cacna1bO55017 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.03■□□□□ 0.64
Cacna1bO55017 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.03■□□□□ 0.64
Cacna1bO55017 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cacna1bO55017 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cacna1bO55017 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cacna1bO55017 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.03■□□□□ 0.64
Cacna1bO55017 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.03■□□□□ 0.64
Cacna1bO55017 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cacna1bO55017 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cacna1bO55017 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 241.2 ms