Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12-1A0N8R1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav12-1A0N8R1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav12-1A0N8R1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12-1A0N8R1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12-1A0N8R1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12-1A0N8R1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12-1A0N8R1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav12-1A0N8R1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12-1A0N8R1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.47■□□□□ 0.23
Trav12-1A0N8R1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav12-1A0N8R1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12-1A0N8R1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12-1A0N8R1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12-1A0N8R1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.47■□□□□ 0.23
Trav12-1A0N8R1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav12-1A0N8R1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav12-1A0N8R1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12-1A0N8R1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12-1A0N8R1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav12-1A0N8R1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12-1A0N8R1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12-1A0N8R1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.46■□□□□ 0.23
Trav12-1A0N8R1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12-1A0N8R1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12-1A0N8R1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trav12-1A0N8R1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12-1A0N8R1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12-1A0N8R1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12-1A0N8R1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12-1A0N8R1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Trav12-1A0N8R1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Trav12-1A0N8R1 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.45■□□□□ 0.22
Trav12-1A0N8R1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12-1A0N8R1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav12-1A0N8R1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12-1A0N8R1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12-1A0N8R1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12-1A0N8R1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12-1A0N8R1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12-1A0N8R1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav12-1A0N8R1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav12-1A0N8R1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav12-1A0N8R1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.44■□□□□ 0.22
Trav12-1A0N8R1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav12-1A0N8R1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav12-1A0N8R1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav12-1A0N8R1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
Trav12-1A0N8R1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-1A0N8R1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.43■□□□□ 0.22
Trav12-1A0N8R1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-1A0N8R1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.43■□□□□ 0.22
Trav12-1A0N8R1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.43■□□□□ 0.22
Trav12-1A0N8R1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-1A0N8R1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-1A0N8R1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-1A0N8R1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Trav12-1A0N8R1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-1A0N8R1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-1A0N8R1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav12-1A0N8R1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-1A0N8R1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-1A0N8R1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-1A0N8R1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12-1A0N8R1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12-1A0N8R1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12-1A0N8R1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12-1A0N8R1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12-1A0N8R1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12-1A0N8R1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12-1A0N8R1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12-1A0N8R1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12-1A0N8R1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12-1A0N8R1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.42■□□□□ 0.22
Trav12-1A0N8R1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12-1A0N8R1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12-1A0N8R1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12-1A0N8R1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav12-1A0N8R1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12-1A0N8R1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12-1A0N8R1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav12-1A0N8R1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12-1A0N8R1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12-1A0N8R1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12-1A0N8R1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12-1A0N8R1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12-1A0N8R1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12-1A0N8R1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12-1A0N8R1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.4■□□□□ 0.22
Trav12-1A0N8R1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav12-1A0N8R1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav12-1A0N8R1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Trav12-1A0N8R1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trav12-1A0N8R1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav12-1A0N8R1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav12-1A0N8R1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav12-1A0N8R1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav12-1A0N8R1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav12-1A0N8R1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav12-1A0N8R1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms