Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smim17A0A504 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smim17A0A504 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smim17A0A504 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.87■□□□□ 0.45
Smim17A0A504 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smim17A0A504 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smim17A0A504 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smim17A0A504 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smim17A0A504 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Smim17A0A504 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.87■□□□□ 0.45
Smim17A0A504 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smim17A0A504 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.86■□□□□ 0.45
Smim17A0A504 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smim17A0A504 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smim17A0A504 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smim17A0A504 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.86■□□□□ 0.45
Smim17A0A504 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smim17A0A504 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smim17A0A504 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smim17A0A504 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Smim17A0A504 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smim17A0A504 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smim17A0A504 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smim17A0A504 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smim17A0A504 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smim17A0A504 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.85■□□□□ 0.45
Smim17A0A504 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smim17A0A504 Grk6-206ENSMUST00000224995 2971 ntBASIC17.85■□□□□ 0.45
Smim17A0A504 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smim17A0A504 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smim17A0A504 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.84■□□□□ 0.45
Smim17A0A504 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Smim17A0A504 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
Smim17A0A504 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Smim17A0A504 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smim17A0A504 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Smim17A0A504 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Smim17A0A504 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smim17A0A504 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smim17A0A504 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smim17A0A504 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.84■□□□□ 0.45
Smim17A0A504 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smim17A0A504 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Smim17A0A504 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smim17A0A504 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smim17A0A504 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smim17A0A504 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smim17A0A504 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smim17A0A504 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smim17A0A504 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smim17A0A504 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Smim17A0A504 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smim17A0A504 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smim17A0A504 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smim17A0A504 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smim17A0A504 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.83■□□□□ 0.44
Smim17A0A504 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smim17A0A504 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smim17A0A504 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smim17A0A504 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smim17A0A504 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smim17A0A504 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim17A0A504 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim17A0A504 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Smim17A0A504 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim17A0A504 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.82■□□□□ 0.44
Smim17A0A504 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smim17A0A504 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim17A0A504 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim17A0A504 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim17A0A504 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Smim17A0A504 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim17A0A504 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim17A0A504 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smim17A0A504 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim17A0A504 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Smim17A0A504 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim17A0A504 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim17A0A504 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim17A0A504 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smim17A0A504 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smim17A0A504 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smim17A0A504 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim17A0A504 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim17A0A504 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smim17A0A504 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Smim17A0A504 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
Smim17A0A504 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smim17A0A504 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smim17A0A504 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Smim17A0A504 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smim17A0A504 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smim17A0A504 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smim17A0A504 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.81■□□□□ 0.44
Smim17A0A504 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smim17A0A504 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.81■□□□□ 0.44
Smim17A0A504 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smim17A0A504 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.81■□□□□ 0.44
Smim17A0A504 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smim17A0A504 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms