Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7n-4A0A075B620 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7n-4A0A075B620 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav7n-4A0A075B620 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav7n-4A0A075B620 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7n-4A0A075B620 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7n-4A0A075B620 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7n-4A0A075B620 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7n-4A0A075B620 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7n-4A0A075B620 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Trav7n-4A0A075B620 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7n-4A0A075B620 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7n-4A0A075B620 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7n-4A0A075B620 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7n-4A0A075B620 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7n-4A0A075B620 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7n-4A0A075B620 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav7n-4A0A075B620 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav7n-4A0A075B620 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav7n-4A0A075B620 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7n-4A0A075B620 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Trav7n-4A0A075B620 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav7n-4A0A075B620 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Trav7n-4A0A075B620 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7n-4A0A075B620 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7n-4A0A075B620 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trav7n-4A0A075B620 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7n-4A0A075B620 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav7n-4A0A075B620 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7n-4A0A075B620 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7n-4A0A075B620 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7n-4A0A075B620 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav7n-4A0A075B620 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7n-4A0A075B620 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav7n-4A0A075B620 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7n-4A0A075B620 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav7n-4A0A075B620 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav7n-4A0A075B620 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7n-4A0A075B620 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7n-4A0A075B620 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7n-4A0A075B620 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7n-4A0A075B620 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7n-4A0A075B620 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7n-4A0A075B620 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav7n-4A0A075B620 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7n-4A0A075B620 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7n-4A0A075B620 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav7n-4A0A075B620 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7n-4A0A075B620 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav7n-4A0A075B620 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7n-4A0A075B620 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7n-4A0A075B620 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7n-4A0A075B620 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7n-4A0A075B620 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7n-4A0A075B620 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7n-4A0A075B620 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.89□□□□□ -0.03
Trav7n-4A0A075B620 AC151971.4-201ENSMUST00000214717 704 ntBASIC14.89□□□□□ -0.03
Trav7n-4A0A075B620 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7n-4A0A075B620 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7n-4A0A075B620 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav7n-4A0A075B620 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7n-4A0A075B620 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7n-4A0A075B620 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Trav7n-4A0A075B620 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trav7n-4A0A075B620 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7n-4A0A075B620 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7n-4A0A075B620 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7n-4A0A075B620 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7n-4A0A075B620 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.88□□□□□ -0.03
Trav7n-4A0A075B620 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7n-4A0A075B620 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav7n-4A0A075B620 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7n-4A0A075B620 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav7n-4A0A075B620 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7n-4A0A075B620 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7n-4A0A075B620 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7n-4A0A075B620 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav7n-4A0A075B620 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7n-4A0A075B620 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.88□□□□□ -0.03
Trav7n-4A0A075B620 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Trav7n-4A0A075B620 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7n-4A0A075B620 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7n-4A0A075B620 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC14.87□□□□□ -0.03
Trav7n-4A0A075B620 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC14.87□□□□□ -0.03
Trav7n-4A0A075B620 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7n-4A0A075B620 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7n-4A0A075B620 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7n-4A0A075B620 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7n-4A0A075B620 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7n-4A0A075B620 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7n-4A0A075B620 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7n-4A0A075B620 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav7n-4A0A075B620 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7n-4A0A075B620 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7n-4A0A075B620 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7n-4A0A075B620 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav7n-4A0A075B620 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7n-4A0A075B620 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.86□□□□□ -0.03
Trav7n-4A0A075B620 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.86□□□□□ -0.03
Trav7n-4A0A075B620 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms